RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 LILRB5O75023 590 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PALMO75781 387 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 ZRANB2O95218 330 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 CD160O95971 181 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 MT-CO1P00395 513 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 KRT1P04264 644 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 CTNNA2P26232 953 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 FNTBP49356 437 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 NUMBP49757 651 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 COPAP53621 1224 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 DMWDQ09019 674 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PAFAH1B3Q15102 231 aaKnown RBP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 DLG2Q15700 870 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 TAZQ16635 292 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 LINGO4Q6UY18 593 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 NT5DC3Q86UY8 548 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PLPP6Q8IY26 295 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 RCOR2Q8IZ40 523 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 EXD1Q8NHP7 514 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 HMGB4Q8WW32 186 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PTPRN2Q92932 1015 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 RBM41Q96IZ5 413 aaKnown RBP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 CELF6Q96J87 481 aaKnown RBP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 MRGPRX1Q96LB2 322 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00398-201ENST00000414407 AMFRQ9UKV5 643 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 GUCA1BQ9UMX6 200 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 PPP2R2CQ9Y2T4 447 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 CKAP5Q14008 2032 aa16.82■□□□□ 0.28
LINC00398-201ENST00000414407 MIF4GDA9UHW6 222 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ALOX15BO15296 676 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 PRAMEF11O60813 436 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 SIN3BO75182 1162 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 TNNT1P13805 278 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ZFXP17010 805 aaPredicted RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 NDUFV2P19404 249 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ELAVL3Q14576 367 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 NCBP2-AS2Q69YL0 99 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 PEX26Q7Z412 305 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF354CQ86Y25 554 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 TMPRSS6Q8IU80 811 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 PQLC3Q8N755 202 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF366Q8N895 744 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 MKRN2Q9H000 416 aaKnown RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 RSPH9Q9H1X1 276 aaPredicted RBP16.81■□□□□ 0.28
LINC00398-201ENST00000414407 KCNF1Q9H3M0 494 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 WDFY4Q6ZS81 3184 aa16.81■□□□□ 0.28
LINC00398-201ENST00000414407 K7ERQ8 282 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 SMAD6O43541 496 aaKnown RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF217O75362 1048 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 CDKN2BP42772 138 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 PXNP49023 591 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 PEX5P50542 639 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 RWDD2BP57060 319 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 COPS2P61201 443 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 IL10RBQ08334 325 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 RFTN1Q14699 578 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 USP39Q53GS9 565 aaKnown RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 SLC9A4Q6AI14 798 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 C22orf39Q6P5X5 142 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 MFSD7Q6UXD7 560 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 PGBD3Q8N328 593 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 KRT35Q92764 455 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 ATOH1Q92858 354 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 RNF25Q96BH1 459 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 SIPA1Q96FS4 1042 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 MTG2Q9H4K7 406 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 PDFQ9HBH1 243 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 SCML1Q9UN30 329 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 MFHAS1Q9Y4C4 1052 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 FARP1Q9Y4F1 1045 aaPredicted RBP16.8■□□□□ 0.28
LINC00398-201ENST00000414407 CAPN6Q9Y6Q1 641 aa16.8■□□□□ 0.28
LINC00398-201ENST00000414407 DFFAO00273 331 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 MCF2LO15068 1137 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 ZSCAN12O43309 604 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF821O75541 412 aaPredicted RBP16.79■□□□□ 0.28
LINC00398-201ENST00000414407 GALNT2Q10471 571 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 TFDP2Q14188 446 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 TFDP3Q5H9I0 405 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 TMCO4Q5TGY1 634 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF776Q68DI1 518 aaPredicted RBP16.79■□□□□ 0.28
LINC00398-201ENST00000414407 SPOCD1Q6ZMY3 1216 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 DSG4Q86SJ6 1040 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 C11orf74Q86VG3 221 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 UBL4BQ8N7F7 174 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 OR2A12Q8NGT7 310 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.79■□□□□ 0.28
LINC00398-201ENST00000414407 GAB3Q8WWW8 586 aa16.79■□□□□ 0.28
LINC00398-201ENST00000414407 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms