RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ACAP2Q15057 778 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 GSTA3Q16772 222 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 FAM160B1Q5W0V3 765 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PM20D1Q6GTS8 502 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LONP2Q86WA8 852 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ECHDC2Q86YB7 292 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 FAM71DQ8N9W8 422 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LRRC8CQ8TDW0 803 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CHTF18Q8WVB6 975 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LRRC37BQ96QE4 947 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ATP6V0BQ99437 205 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 C16orf70Q9BSU1 422 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 AARSD1Q9BTE6 412 aaKnown RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PITPNM3Q9BZ71 974 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 POLR3FQ9H1D9 316 aaPredicted RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 GOLPH3Q9H4A6 298 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 KCNK9Q9NPC2 374 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LMCD1Q9NZU5 365 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ARHGAP26Q9UNA1 814 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 NCANO14594 1321 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 AP3D1O14617 1153 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 QDPRP09417 244 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 TMEM253P0C7T8 217 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 UCHL3P15374 230 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 TLX1P31314 330 aaPredicted RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 TIE1P35590 1138 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 DPP6P42658 865 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CPA2P48052 419 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 DIO1P49895 249 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CLCN3P51790 818 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 IL9RQ01113 521 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LRRC32Q14392 662 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 SMAD2Q15796 467 aaKnown RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CCDC6Q16204 474 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 HHATQ5VTY9 493 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 KIAA1211LQ6NV74 962 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 VSTM1Q6UX27 236 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF720Q7Z2F6 126 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PPFIBP2Q8ND30 876 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LZICQ8WZA0 190 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PTPRN2Q92932 1015 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PLEKHG4BQ96PX9 1271 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 PCMTD2Q9NV79 361 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ATXN10Q9UBB4 475 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ARMCX3Q9UH62 379 aaPredicted RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 TMCO1Q9UM00 188 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ACTL7BQ9Y614 415 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CAPN8A6NHC0 703 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 EIF4E1BA6NMX2 242 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 MIF4GDA9UHW6 222 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 H2AFYO75367 372 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CSDE1O75534 798 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 FGF18O76093 207 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CYBAP13498 195 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PLS3P13797 630 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 INSRRP14616 1297 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CSF2RAP15509 400 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CHMP24386 653 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 RFC1P35251 1148 aaPredicted RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PTGIRP43119 386 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 VPS41P49754 854 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 BMPR2Q13873 1038 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 TARBP2Q15633 366 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PTPRNQ16849 979 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 EDRF1Q3B7T1 1238 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 ZACNQ401N2 412 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 SLC22A25Q6T423 547 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 ART4Q93070 314 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 TUBB6Q9BUF5 446 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 OLFML3Q9NRN5 406 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PADI4Q9UM07 663 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 EMSYQ7Z589 1322 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 C16orf96A6NNT2 1141 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 L7N2F9 121 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 MAGEB2O15479 319 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 TGFB1I1O43294 461 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 DGAT1O75907 488 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 UPP2O95045 317 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 EDN1P05305 212 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 DLDP09622 509 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 BRAFP15056 766 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 PTPN4P29074 926 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CACNA2D1P54289 1103 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 RUNX1T1Q06455 604 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 MGAT5Q09328 741 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 NFE2L1Q14494 772 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 DBX2Q6ZNG2 339 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 FRMD5Q7Z6J6 570 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 UBL4BQ8N7F7 174 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms