RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SEMA3CQ99985 751 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 CRYL1Q9Y2S2 319 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 V9GYQ6 96 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 CLDN11O75508 207 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 KRT8P05787 483 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 ADRA1DP25100 572 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 VHLP40337 213 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 RXRGP48443 463 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 MRPL45Q9BRJ2 306 aaKnown RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 DEAF1O75398 565 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 TTC7BQ86TV6 843 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 GRIN3AQ8TCU5 1115 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 MRPL48Q96GC5 212 aaKnown RBP17.53■□□□□ 0.4
PHRF1-202ENST00000413872 FAXDC2Q96IV6 333 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 SLC39A8Q9C0K1 460 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 SH3BP4Q9P0V3 963 aa17.53■□□□□ 0.4
PHRF1-202ENST00000413872 USP12O75317 370 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 RASSF9O75901 435 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 FTH1P02794 183 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 BMP6P22004 513 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 PLIN5Q00G26 463 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 OR52K1Q8NGK4 314 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 ZFYVE19Q96K21 471 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 BTN2A3PQ96KV6 586 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 CYLDQ9NQC7 956 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 TRPC4Q9UBN4 977 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 hCG_1818297A0A087WSY0 165 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 BAIAP3O94812 1187 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 FGF1P05230 155 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 LTA4HP09960 611 aaKnown RBP17.52■□□□□ 0.4
PHRF1-202ENST00000413872 S100A5P33763 92 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 MAPK9P45984 424 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 GPR15P49685 360 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 FNDC5Q8NAU1 212 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 ACP6Q9NPH0 428 aa17.52■□□□□ 0.4
PHRF1-202ENST00000413872 HTR1BP28222 390 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 FAAP100Q0VG06 881 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 TARBP2Q15633 366 aaKnown RBP17.52■□□□□ 0.39
PHRF1-202ENST00000413872 HLA-DQA1Q5Y7H0 255 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 CES3Q6UWW8 571 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 RGL4Q8IZJ4 473 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 KYQ8NBH2 561 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 FBXO22Q8NEZ5 403 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 THAP11Q96EK4 314 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 NID2Q14112 1375 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 FZD9O00144 591 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 TSPAN1O60635 241 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 SNUPNO95149 360 aaKnown RBP17.52■□□□□ 0.39
PHRF1-202ENST00000413872 DRG2P55039 364 aaKnown RBP17.52■□□□□ 0.39
PHRF1-202ENST00000413872 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 CERS2Q96G23 380 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 TLE6Q9H808 572 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 BATF3Q9NR55 127 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.39
PHRF1-202ENST00000413872 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 MAGEC1O60732 1142 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 SEC22BO75396 215 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 GPR1P46091 355 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ALDH6A1Q02252 535 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ADCK1Q86TW2 530 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 HEXDCQ8WVB3 486 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 BSNDQ8WZ55 320 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 COMMD8Q9NX08 183 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 SAE1Q9UBE0 346 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 EOMESO95936 686 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 SMPD1P17405 629 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 HPCAL1P37235 193 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ALDH9A1P49189 494 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 POU5F1Q01860 360 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ACSM2AQ08AH3 577 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ACSM2BQ68CK6 577 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 KIAA1324Q6UXG2 1013 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 NPAS4Q8IUM7 802 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 OR8D1Q8WZ84 308 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 MCCC1Q96RQ3 725 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 PIH1D1Q9NWS0 290 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 AGO1Q9UL18 857 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 CILPO75339 1184 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ABHD2P08910 425 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ACADSP16219 412 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 ZNF23P17027 643 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 FCRL2Q96LA5 508 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 EFR3BQ9Y2G0 817 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 NDUFAF1Q9Y375 327 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 IGLV3-22A0A075B6J6 115 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 GOT1P17174 413 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 RPL22P35268 128 aaKnown RBP17.51■□□□□ 0.39
PHRF1-202ENST00000413872 NME5P56597 212 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 POTEHQ6S545 545 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 IRF2BP2Q7Z5L9 587 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 C12orf29Q8N999 325 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 HGH1Q9BTY7 390 aa17.51■□□□□ 0.39
PHRF1-202ENST00000413872 A0A1W2PQ67 120 aa17.5■□□□□ 0.39
PHRF1-202ENST00000413872 CLDN5O00501 218 aa17.5■□□□□ 0.39
PHRF1-202ENST00000413872 TPST1O60507 370 aa17.5■□□□□ 0.39
PHRF1-202ENST00000413872 IMPDH2P12268 514 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms