RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ZNF614Q8N883 585 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 STAG3L4Q8TBR4 150 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PHB2Q99623 299 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RUSC1Q9BVN2 902 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PLA2G12BQ9BX93 195 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 C14orf105Q9NVL8 296 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 IKZF3Q9UKT9 509 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TBX20Q9UMR3 447 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZSCAN5CA6NGD5 496 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PDCD5O14737 125 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RB1P06400 928 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PAEPP09466 180 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SUPT20HL2P0C7V6 817 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 FUT11Q495W5 492 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PYDC2Q56P42 97 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TCEAL6Q6IPX3 200 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RIPOR1Q6ZS17 1223 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 STK32CQ86UX6 486 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SLITRK4Q8IW52 837 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RAET1EQ8TD07 263 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 HCN3Q9P1Z3 774 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 IFT80Q9P2H3 777 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MYH10P35580 1976 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ERVK-7P63135 1459 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PLIN3O60664 434 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 GYS1P13807 737 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ARPC4P59998 168 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 STK4Q13043 487 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ZFP69Q49AA0 526 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 UTS2BQ765I0 119 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 RNF180Q86T96 592 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SLC25A41Q8N5S1 370 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 DNAJB8Q8NHS0 232 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 REEP2Q9BRK0 252 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 USP18Q9UMW8 372 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF451Q9Y4E5 1061 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SLC28A1O00337 649 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CHADO15335 359 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 TPST1O60507 370 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SLC2A4P14672 509 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 S100A2P29034 98 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 DLG1Q12959 904 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ABRQ12979 859 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SF3B3Q15393 1217 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PIWIL4Q7Z3Z4 852 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ATCAYQ86WG3 371 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SLC4A11Q8NBS3 891 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 FAM49BQ9NUQ9 324 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 DDIT4Q9NX09 232 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 GRIP1Q9Y3R0 1128 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ADCY10Q96PN6 1610 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 F5H6K3 240 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 TRAFD1O14545 582 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PROSCO94903 275 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CCR1P32246 355 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PSEN1P49768 467 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 FXR1P51114 621 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PNLIPRP1P54315 467 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ATP6V0D1P61421 351 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 KLRC3Q07444 240 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SGCGQ13326 291 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 USP45Q70EL2 814 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 METTL16Q86W50 562 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 FAM13CQ8NE31 585 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PTCD2Q8WV60 388 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CGRRF1Q99675 332 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 NOL11Q9H8H0 719 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 KCNH7Q9NS40 1196 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 MCUBQ9NWR8 336 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF222Q9UK12 451 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 R3HDM2Q9Y2K5 976 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CDC42BPBQ9Y5S2 1711 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 MED14O60244 1454 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SCGB2A1O75556 95 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CPSF4O95639 269 aaKnown RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 MCAMP43121 646 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 CCNIQ14094 377 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ACAP2Q15057 778 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 MILR1Q7Z6M3 343 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ACE2Q9BYF1 805 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-203ENST00000412145 NFKBIZQ9BYH8 718 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SNX8Q9Y5X2 465 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SPATA31A6Q5VVP1 1343 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 ORC5O43913 435 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 PSMG1O95456 288 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 SERPINA3P01011 423 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 RHOCP08134 193 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 GSTT1P30711 240 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 C1orf189Q5VU69 101 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 USP17L6PQ6QN14 398 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 DHDDSQ86SQ9 333 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 KCNMB4Q86W47 210 aa7.48□□□□□ -1.21
PTPN3-203ENST00000412145 TBC1D21Q8IYX1 336 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms