RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 ITGAVP06756 1048 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 PRLRP16471 622 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 DEUP1Q05D60 604 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 FAM102AQ5T9C2 384 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 SFMBT2Q5VUG0 894 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 TSC1Q92574 1164 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 CNDP2Q96KP4 475 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 CFAP57Q96MR6 1250 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 NOX5Q96PH1 765 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 MUC3BQ9H195 1237 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 GANQ9H2C0 597 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 TNKS2Q9H2K2 1166 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 SYNCQ9H7C4 482 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 FZD3Q9NPG1 666 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 ZFR2Q9UPR6 939 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-203ENST00000411971 E9PAM4 449 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 DFNA5O60443 496 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 ZMPSTE24O75844 475 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 RHOCP08134 193 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 UCHL3P15374 230 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 CHRNB2P17787 502 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 ACADVLP49748 655 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 NOMO3P69849 1222 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 SFSWAPQ12872 951 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 BRMS1LQ5PSV4 323 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 PHLDB2Q86SQ0 1253 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 TRIM69Q86WT6 500 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 EMC1Q8N766 993 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 MFSD2AQ8NA29 543 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 TMEM35BQ8NCS4 154 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 HNRNPLLQ8WVV9 542 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 NDFIP2Q9NV92 336 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
SCAMP4-203ENST00000411971 COL27A1Q8IZC6 1860 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 F8VZ95 297 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 ALOX15BO15296 676 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 SLC31A1O15431 190 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 SLC7A4O43246 635 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 RNGTTO60942 597 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 ENDOD1O94919 500 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 LDOC1O95751 146 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 CD160O95971 181 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 CHRNA3P32297 505 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 RXRGP48443 463 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 OXCT1P55809 520 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 COL9A2Q14055 689 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM131BQ86XD5 332 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 KDM4CQ9H3R0 1056 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 DKK4Q9UBT3 224 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 ASXL3Q9C0F0 2248 aa16.89■□□□□ 0.29
SCAMP4-203ENST00000411971 FASNP49327 2511 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 A0A1W2PQU0 124 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM72CH0Y354 149 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 TRIM38O00635 465 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 SRGAP2O75044 1071 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ZNF18P17022 549 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ERCC5P28715 1186 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 SCNN1AP37088 669 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 CLDN2P57739 230 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ARF5P84085 180 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FGL2Q14314 439 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ZNF284Q2VY69 593 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM72AQ5TYM5 149 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM46CQ5VWP2 391 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 NAA35Q5VZE5 725 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 SEL1L3Q68CR1 1132 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM72DQ6L9T8 149 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 C22orf39Q6P5X5 142 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 DPY19L3Q6ZPD9 716 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 PRPF39Q86UA1 669 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ERICH1Q86X53 443 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 FAM72BQ86X60 149 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ZDHHC17Q8IUH5 632 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 GALNT15Q8N3T1 639 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 SLC25A45Q8N413 288 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 DCAF4L2Q8NA75 395 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 JOSD2Q8TAC2 188 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 GRIN3AQ8TCU5 1115 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 ERVMER34-1Q9H9K5 563 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 METTL5Q9NRN9 209 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 UCKL1Q9NWZ5 548 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 STAP1Q9ULZ2 295 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 NEU3Q9UQ49 428 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 WASF2Q9Y6W5 498 aa16.88■□□□□ 0.29
SCAMP4-203ENST00000411971 LRRK1Q38SD2 2015 aa16.87■□□□□ 0.29
SCAMP4-203ENST00000411971 C1QTNF3-AMACRE9PGA6 284 aa16.87■□□□□ 0.29
SCAMP4-203ENST00000411971 KPNA3O00505 521 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-203ENST00000411971 GFPT2O94808 682 aa16.87■□□□□ 0.29
SCAMP4-203ENST00000411971 GIMD1P0DJR0 217 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms