RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 OLIG2Q13516 323 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TRIP10Q15642 601 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 DLG2Q15700 870 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 MMEL1Q495T6 779 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TCHHL1Q5QJ38 904 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CERCAMQ5T4B2 595 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 ZC3HC1Q86WB0 502 aaKnown RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 PQLC1Q8N2U9 271 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 ICA1LQ8NDH6 482 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 ZSCAN18Q8TBC5 510 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CAB39LQ9H9S4 337 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TADA2AO75478 443 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 DDHD2O94830 711 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 LTFP02788 710 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 GSTT1P30711 240 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 POLE2P56282 527 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 DYNC1I2Q13409 638 aaKnown RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 RFTN1Q14699 578 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 LSM12Q3MHD2 195 aaKnown RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 RAB41Q5JT25 222 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 UBXN11Q5T124 520 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 IQSEC1Q6DN90 963 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CCDC117Q8IWD4 279 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CNTN4Q8IWV2 1026 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 MARVELD2Q8N4S9 558 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 STYXQ8WUJ0 223 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 TSGA13Q96PP4 275 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 HAPLN3Q96S86 360 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-208ENST00000410011 CHRAC1Q9NRG0 131 aa16.98■□□□□ 0.31
LIMS2-208ENST00000410011 SMIM31A0A1B0GVY4 71 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 SBK3P0C264 359 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 FAM200BP0CF97 657 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 PPARGP37231 505 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-208ENST00000410011 GTF2A2P52657 109 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 TMEM62Q0P6H9 643 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 CYLC2Q14093 348 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-208ENST00000410011 PRPSAP1Q14558 356 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 UGP2Q16851 508 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 CNPY1Q3B7I2 92 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 PIGGQ5H8A4 983 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 AP1ARQ63HQ0 302 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 HFE2Q6ZVN8 426 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 DSELQ8IZU8 1212 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 NPWQ8N729 165 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 CATSPER1Q8NEC5 780 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ATXN7L3BQ96GX2 97 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 TSNARE1Q96NA8 513 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ANLNQ9NQW6 1124 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 IARS2Q9NSE4 1012 aaKnown RBP16.97■□□□□ 0.31
LIMS2-208ENST00000410011 MRGBPQ9NV56 204 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 COMMD3-BMI1R4GMX3 469 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 SYNJ2BP-COX16A0A087WUM0 186 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 I6L893 689 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-208ENST00000410011 CLDN5O00501 218 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 NRP1O14786 923 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 GRID2O43424 1007 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 SBF1O95248 1867 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ALDH1A3P47895 512 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 GRIA4P48058 902 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 CHN2P52757 468 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 DLG1Q12959 904 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ZBTB17Q13105 803 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 PDK3Q15120 406 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 LRRC36Q1X8D7 754 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 UGT2A3Q6UWM9 527 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 PGAM4Q8N0Y7 254 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 OR6J1Q8NGC5 347 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 DLG3Q92796 817 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 COX16Q9P0S2 106 aa16.97■□□□□ 0.31
LIMS2-208ENST00000410011 ATP9BO43861 1147 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 NFKB1P19838 968 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 FOLH1Q04609 750 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 NSUN2Q08J23 767 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIMS2-208ENST00000410011 GRM3Q14832 879 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 ZNF423Q2M1K9 1284 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.31
LIMS2-208ENST00000410011 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 CDCA5Q96FF9 252 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 EPAS1Q99814 870 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 TASP1Q9H6P5 420 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 KLK14Q9P0G3 267 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 SLC39A10Q9ULF5 831 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 RAB26Q9ULW5 256 aa16.96■□□□□ 0.31
LIMS2-208ENST00000410011 E2F8A0AVK6 867 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 ANKRD33BA6NCL7 494 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 ZMPSTE24O75844 475 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 CHRNGP07510 517 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 CXCR3P49682 368 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms