RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 EFTUD2Q15029 972 aaKnown RBP eCLIP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 RAB30Q15771 203 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 DUSP6Q16828 381 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 CXorf57Q6NSI4 855 aaKnown RBP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 GRASPQ7Z6J2 395 aaPredicted RBP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 BBS7Q8IWZ6 715 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 PALM2Q8IXS6 379 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 HJURPQ8NCD3 748 aaPredicted RBP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 RIN3Q8TB24 985 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 CFAP36Q96G28 342 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 SIGLEC10Q96LC7 697 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 FCRL5Q96RD9 977 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 ROPN1BQ9BZX4 212 aaPredicted RBP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 ROPN1Q9HAT0 212 aaPredicted RBP14.33□□□□□ -0.11
GPNMB-203ENST00000409458 PLAC1Q9HBJ0 212 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 CTNNAL1Q9UBT7 734 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 MSRAQ9UJ68 235 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 CCL26Q9Y258 94 aa14.33□□□□□ -0.11
GPNMB-203ENST00000409458 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 ERI2A8K979 691 aaKnown RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 PRAMEF11O60813 436 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TCEA3O75764 348 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 NEBLO76041 1014 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 POU2F2P09086 479 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TSHRP16473 764 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 MGAT1P26572 445 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 GCAP28676 217 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 PHBP35232 272 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 NRIP1P48552 1158 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 SESN2P58004 480 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF177Q13360 481 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 ARHGAP15Q53QZ3 475 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 C3orf62Q6ZUJ4 267 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 HTR3DQ70Z44 454 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 SETD3Q86TU7 594 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 CMTM8Q8IZV2 173 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TEX26Q8N6G2 289 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 LEMD2Q8NC56 503 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 OR52K1Q8NGK4 314 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 SH3RF2Q8TEC5 729 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 FBF1Q8TES7 1133 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 LRRC39Q96DD0 335 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TRIM56Q9BRZ2 755 aaKnown RBP14.33□□□□□ -0.12
GPNMB-203ENST00000409458 MAGEH1Q9H213 219 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TLE6Q9H808 572 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 NT5MQ9NPB1 228 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 RABGEF1Q9UJ41 708 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 TBC1D30Q9Y2I9 924 aa14.33□□□□□ -0.12
GPNMB-203ENST00000409458 EXOC1LA0A1B0GW35 172 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 RGS16O15492 202 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 IVLP07476 585 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 CEBPBP17676 345 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 GLDCP23378 1020 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 AVPR1AP37288 418 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 MMP13P45452 471 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 IFNAR2P48551 515 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 RENBPP51606 427 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 MAXP61244 160 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 CRADDP78560 199 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 IL31Q6EBC2 164 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 CROCCP2Q86T23 111 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 CARNMT1Q8N4J0 409 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 C12orf76Q8N812 135 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 VN1R2Q8NFZ6 395 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 FAM76AQ8TAV0 307 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 TLCD1Q96CP7 247 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 PGM2Q96G03 612 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 EBNA1BP2Q99848 306 aaKnown RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 APOL2Q9BQE5 337 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 LMAN2LQ9H0V9 348 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 CASS4Q9NQ75 786 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 SYBUQ9NX95 663 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 ZC3H7BQ9UGR2 993 aaKnown RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 DPP7Q9UHL4 492 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 NOVA2Q9UNW9 492 aaKnown RBP14.32□□□□□ -0.12
GPNMB-203ENST00000409458 ZNF510Q9Y2H8 683 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 ACTL7AQ9Y615 435 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 TRANK1O15050 2925 aa14.32□□□□□ -0.12
GPNMB-203ENST00000409458 LUC7L3O95232 432 aaKnown RBP14.31□□□□□ -0.12
GPNMB-203ENST00000409458 PRAMEF12O95522 483 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 ETFBP38117 255 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 TNK2Q07912 1038 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 LBRQ14739 615 aaKnown RBP14.31□□□□□ -0.12
GPNMB-203ENST00000409458 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 TMCO4Q5TGY1 634 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 POTEHQ6S545 545 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 PGBD5Q8N414 524 aa14.31□□□□□ -0.12
GPNMB-203ENST00000409458 CPXM2Q8N436 756 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms