RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 VPS54Q9P1Q0 977 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TFR2Q9UP52 801 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SMG5Q9UPR3 1016 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 FADS3Q9Y5Q0 445 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CFAP20Q9Y6A4 193 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 XDHP47989 1333 aa5.65□□□□□ -1.5
CLK1-202ENST00000409403 PTPRZ1P23471 2315 aaPredicted RBP5.65□□□□□ -1.5
CLK1-202ENST00000409403 HTR3EA5X5Y0 456 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 EIF4E1BA6NMX2 242 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 BTBD18B2RXH4 712 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 F8W8V4 182 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 CCDC22O60826 627 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 SUPT3HO75486 399 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 PDE5AO76074 875 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ENDOD1O94919 500 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 RHOBTB3O94955 611 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 GNA14O95837 355 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 GAS8O95995 478 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 SHBGP04278 402 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 MYBL1P10243 752 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 STX2P32856 288 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 HOXD12P35452 270 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 KRT2P35908 639 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ARPC4P59998 168 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 TUBA4AP68366 448 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ADAM15Q13444 863 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 IL10RAQ13651 578 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 KRT72Q14CN4 511 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 RCN1Q15293 331 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 MST1LQ2TV78 715 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 P3H1Q32P28 736 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 CRY2Q49AN0 593 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ZNF385BQ569K4 471 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 TNFAIP8L3Q5GJ75 292 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 SYCP2LQ5T4T6 812 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 MAP3K21Q5TCX8 1036 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ARL6IP4Q66PJ3 421 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 PPP4R4Q6NUP7 873 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 TTI2Q6NXR4 508 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 PDXDC1Q6P996 788 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 FOXR2Q6PJQ5 311 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 C4orf50Q6ZRC1 276 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 TRMT10CQ7L0Y3 403 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 CHST15Q7LFX5 561 aaPredicted RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 MICU3Q86XE3 530 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 RASGEF1CQ8N431 466 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 KLHL36Q8N4N3 616 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 HOXB13Q92826 284 aaPredicted RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 CASP10Q92851 521 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 GCDHQ92947 438 aaPredicted RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 ARHGEF2Q92974 986 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 LPPQ93052 612 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 P2RX5Q93086 422 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ABTB1Q969K4 478 aaPredicted RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 EDC3Q96F86 508 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 MPP4Q96JB8 637 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 TGS1Q96RS0 853 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 SLC38A3Q99624 504 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.65□□□□□ -1.513e-11■□□□□ 10.1
CLK1-202ENST00000409403 FAIMQ9NVQ4 179 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 PLK2Q9NYY3 685 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 CEP72Q9P209 647 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ADGRA2Q96PE1 1338 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.51
CLK1-202ENST00000409403 DNAH12Q6ZR08 3092 aa5.65□□□□□ -1.51
CLK1-202ENST00000409403 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 TRIM43BA6NCK2 446 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PODXLO00592 558 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 CAPN9O14815 690 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 BUB1O43683 1085 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 CIB2O75838 187 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ALDH1A2O94788 518 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 GFPT2O94808 682 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PSMG1O95456 288 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 FTCDO95954 541 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 IFIT1P09914 478 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 NPEPPSP55786 919 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 WNT3AP56704 352 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PTENP60484 403 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 PSMC1P62191 440 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 AP2B1P63010 937 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ATP2C1P98194 919 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 PRKCZQ05513 592 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ASPHQ12797 758 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 SLC39A6Q13433 755 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 UBE4AQ14139 1066 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 USP10Q14694 798 aaKnown RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 PKN1Q16512 942 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 SLC18A3Q16572 532 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 LRRC26Q2I0M4 334 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 ASTE1Q2TB18 679 aaPredicted RBP5.64□□□□□ -1.51
CLK1-202ENST00000409403 SLC45A4Q5BKX6 768 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 TMEM53Q6P2H8 277 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 RRAGAQ7L523 313 aa5.64□□□□□ -1.51
CLK1-202ENST00000409403 MAEAQ7L5Y9 396 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms