RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TBXAS1P24557 533 aaPredicted RBP17.11■□□□□ 0.33
CHMP3-203ENST00000409225 VASPP50552 380 aaPredicted RBP17.11■□□□□ 0.33
CHMP3-203ENST00000409225 OXCT1P55809 520 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 CENPCQ03188 943 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 FZD2Q14332 565 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 DEFB133Q30KQ1 61 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 RABGAP1LQ5R372 815 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 PERM1Q5SV97 790 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 ATP6V0D2Q8N8Y2 350 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 OR52K2Q8NGK3 314 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 RNF34Q969K3 372 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 ALG14Q96F25 216 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 ARHGAP9Q9BRR9 750 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 ST7Q9NRC1 585 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 COQ4Q9Y3A0 265 aa17.11■□□□□ 0.33
CHMP3-203ENST00000409225 H3BM21 787 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 MUSKO15146 869 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CETN3O15182 167 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CASC3O15234 703 aaKnown RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CSF2P04141 144 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CHRNA3P32297 505 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CCDC15Q0P6D6 951 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 NR0B2Q15466 257 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 STILQ15468 1287 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 TTC39BQ5VTQ0 682 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 USP53Q70EK8 1073 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 DCP2Q8IU60 420 aaKnown RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 SH2D3CQ8N5H7 860 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 LMX1AQ8TE12 382 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 EXTL1Q92935 676 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 BMFQ96LC9 184 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 SYNDIG1Q9H7V2 258 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 DYRK4Q9NR20 520 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 NCKIPSDQ9NZQ3 722 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 VPS28Q9UK41 221 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 ATXN7L1Q9ULK2 861 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 FARP1Q9Y4F1 1045 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 UBR5O95071 2799 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-203ENST00000409225 COL12A1Q99715 3063 aa17.1■□□□□ 0.33
CHMP3-203ENST00000409225 CCDC187A0A096LP49 1063 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 EME2A4GXA9 379 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 POM121BA6NF01 834 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 KCNU1A8MYU2 1149 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 SART1O43290 800 aaKnown RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 AQP9O43315 295 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 TCEA3O75764 348 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 TRUB2O95900 331 aaKnown RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 NME1P15531 152 aaKnown RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 DPYDQ12882 1025 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 FBXL22Q6P050 247 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 PARGQ86W56 976 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 SMYD4Q8IYR2 804 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 RPRD1AQ96P16 312 aaPredicted RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 STARD5Q9NSY2 213 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 SLC12A6Q9UHW9 1150 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 IPO11Q9UI26 975 aaKnown RBP17.09■□□□□ 0.33
CHMP3-203ENST00000409225 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 HS3ST3A1Q9Y663 406 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 CSNK1G3Q9Y6M4 447 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 BSNQ9UPA5 3926 aa17.09■□□□□ 0.33
CHMP3-203ENST00000409225 SYNJ2BP-COX16A0A087WUM0 186 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 SPTY2D1-AS1A0A0U1RR47 76 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 RNF103O00237 685 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 GJB6O95452 261 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 F13A1P00488 732 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 ITGA2BP08514 1039 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.32
CHMP3-203ENST00000409225 SRCP12931 536 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.32
CHMP3-203ENST00000409225 IRAK1P51617 712 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 PDX1P52945 283 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 TMEM259Q4ZIN3 620 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 KYAT3Q6YP21 454 aaKnown RBP17.08■□□□□ 0.32
CHMP3-203ENST00000409225 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
CHMP3-203ENST00000409225 CHST14Q8NCH0 376 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 TMIEQ8NEW7 156 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 FAM174AQ8TBP5 190 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 GRIN3AQ8TCU5 1115 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 KAT5Q92993 513 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 IL12RB2Q99665 862 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 GPR27Q9NS67 375 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHMP3-203ENST00000409225 COX16Q9P0S2 106 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 SALL4Q9UJQ4 1053 aa17.08■□□□□ 0.32
CHMP3-203ENST00000409225 BOD1L1Q8NFC6 3051 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
CHMP3-203ENST00000409225 K7ERQ8 282 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 RAD51BO15315 384 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SUV39H1O43463 412 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 MT-CO1P00395 513 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 IGLV3-25P01717 112 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms