RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GDF3Q9NR23 364 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 OR14I1A6ND48 311 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 REM1O75628 298 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 CATSPERZQ9NTU4 200 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ARID1BQ8NFD5 2236 aaPredicted RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 A0A096LPK6 155 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 IDH2P48735 452 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ATP13A5Q4VNC0 1218 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 CBWD3Q5JTY5 395 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 CBWD5Q5RIA9 395 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TCAIMQ8N3R3 496 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ZNF540Q8NDQ6 660 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TEX47Q8TBZ9 253 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ZNF607Q96SK3 696 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 PLA2G4CQ9UP65 541 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 GSSP48637 474 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 PLET1Q6UQ28 207 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 MINDY2Q8NBR6 621 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 GPR182O15218 404 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 SNX4O95219 450 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 UMPSP11172 480 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 RPL22P35268 128 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ARF5P84085 180 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 AAGABQ6PD74 315 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 STOX2Q9P2F5 926 aaPredicted RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 MYO3AQ8NEV4 1616 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 DNAJA2O60884 412 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 PARNO95453 639 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TLX1P31314 330 aaPredicted RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ACTR3P61158 418 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 USP46P62068 366 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TAF5Q15542 800 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 ERICH5Q6P6B1 374 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 IL27RAQ6UWB1 636 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 C17orf50Q8WW18 174 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 PIGBQ92521 554 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 MRPS31Q92665 395 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TBL1YQ9BQ87 522 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 MRPL57Q9BQC6 102 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
SHANK2-203ENST00000409161 CAB39LQ9H9S4 337 aa12.31□□□□□ -0.44
SHANK2-203ENST00000409161 UGT2B11O75310 529 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
SHANK2-203ENST00000409161 ARMC8Q8IUR7 673 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 NELL1Q92832 810 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 PHF21BQ96EK2 531 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
SHANK2-203ENST00000409161 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
SHANK2-203ENST00000409161 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 MAGEC1O60732 1142 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 THRBP10828 461 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 STARD3Q14849 445 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 CYP2A13Q16696 494 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 UPB1Q9UBR1 384 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 ZBTB14O43829 449 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 GLI1P08151 1106 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 POU6F1Q14863 301 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 TMIEQ8NEW7 156 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 NECTIN3Q9NQS3 549 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 KCNH7Q9NS40 1196 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 GNPTGQ9UJJ9 305 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 CPS1P31327 1500 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 ARHGEF33A8MVX0 844 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 MTA2O94776 668 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 GRIA3P42263 894 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 MTAPQ13126 283 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 CLHC1Q8NHS4 586 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 HGH1Q9BTY7 390 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 KIAA1683Q9H0B3 1180 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 VPS4AQ9UN37 437 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 SEMA3DO95025 777 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 IFNGP01579 166 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 MMP10P09238 476 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
SHANK2-203ENST00000409161 DGKAP23743 735 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 TRIM28Q13263 835 aaKnown RBP12.3□□□□□ -0.44
SHANK2-203ENST00000409161 MTM1Q13496 603 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 NFKBIZQ9BYH8 718 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
SHANK2-203ENST00000409161 BBIP1A8MTZ0 92 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms