RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IPMKQ8NFU5 416 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 AUTS2Q8WXX7 1259 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 ELAC2Q9BQ52 826 aaKnown RBP19.31■□□□□ 0.68
USP39-202ENST00000409025 IL23AQ9NPF7 189 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.31■□□□□ 0.68
USP39-202ENST00000409025 PCDHB12Q9Y5F1 795 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 FAM169AQ9Y6X4 670 aa19.31■□□□□ 0.68
USP39-202ENST00000409025 PEX11BO96011 259 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 HSPA8P11142 646 aaKnown RBP19.3■□□□□ 0.68
USP39-202ENST00000409025 TPH1P17752 444 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 YBEYP58557 167 aaPredicted RBP19.3■□□□□ 0.68
USP39-202ENST00000409025 TWF1Q12792 350 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 BMPR2Q13873 1038 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 PDK4Q16654 411 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 C5orf22Q49AR2 442 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 ANKRD20A4Q4UJ75 823 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 MARC1Q5VT66 337 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 CIR1Q86X95 450 aaPredicted RBP19.3■□□□□ 0.68
USP39-202ENST00000409025 TCEAL8Q8IYN2 117 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 ANKS4BQ8N8V4 417 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 FCRL3Q96P31 734 aaPredicted RBP19.3■□□□□ 0.68
USP39-202ENST00000409025 TMEM106CQ9BVX2 250 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 RETREG1Q9H6L5 497 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 ZFATQ9P243 1243 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 STK39Q9UEW8 545 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 PRDM4Q9UKN5 801 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 MAFFQ9ULX9 164 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 SOX13Q9UN79 622 aa19.3■□□□□ 0.68
USP39-202ENST00000409025 J3KR12 359 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 COPEO14579 308 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 NEK3P51956 506 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 EPHB3P54753 998 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 CREMQ03060 361 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 MROH9Q5TGP6 573 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 PACS1Q6VY07 963 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 RGS9BPQ6ZS82 235 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 GPR65Q8IYL9 337 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 PABPC5Q96DU9 382 aaKnown RBP19.29■□□□□ 0.68
USP39-202ENST00000409025 FICDQ9BVA6 458 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 IQCGQ9H095 443 aaKnown RBP19.29■□□□□ 0.68
USP39-202ENST00000409025 SLC25A51Q9H1U9 297 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 ENTPD7Q9NQZ7 604 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 TXNDC16Q9P2K2 825 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 UXTQ9UBK9 157 aaPredicted RBP19.29■□□□□ 0.68
USP39-202ENST00000409025 GRID1Q9ULK0 1009 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 RFPL1O75677 317 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 ERVK-10P10266 1014 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 ADRA1DP25100 572 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 IL10RBQ08334 325 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 DNAJC3Q13217 504 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 MPP3Q13368 585 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 TIFABQ6ZNK6 161 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 DNAJB7Q7Z6W7 309 aaPredicted RBP19.29■□□□□ 0.68
USP39-202ENST00000409025 LRRC8CQ8TDW0 803 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 PSMG2Q969U7 264 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 AZIN2Q96A70 460 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 MYEOVQ96EZ4 313 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 FSD1LQ9BXM9 530 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 NT5MQ9NPB1 228 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 SLC17A7Q9P2U7 560 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 INSL5Q9Y5Q6 135 aa19.29■□□□□ 0.68
USP39-202ENST00000409025 ATXN2Q99700 1313 aaKnown RBP19.29■□□□□ 0.68
USP39-202ENST00000409025 KIAA1671Q9BY89 1806 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 ZCWPW2A0A1B0GU75 182 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 ZBBXA8MT70 800 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 PMPCBO75439 489 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 KIAA0754O94854 1291 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 ALADP13716 330 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 SLC6A4P31645 630 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 CCNFP41002 786 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 IFT88Q13099 833 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 SERINC3Q13530 473 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 ZKSCAN8Q15776 578 aaPredicted RBP19.28■□□□□ 0.68
USP39-202ENST00000409025 FAM133BQ5BKY9 247 aaKnown RBP19.28■□□□□ 0.68
USP39-202ENST00000409025 RABGAP1LQ5R372 815 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 RFWD3Q6PCD5 774 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 C6orf89Q6UWU4 347 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 DENND1CQ8IV53 801 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 CHRAC1Q9NRG0 131 aa19.28■□□□□ 0.68
USP39-202ENST00000409025 RRP15Q9Y3B9 282 aaKnown RBP19.28■□□□□ 0.68
USP39-202ENST00000409025 HMX2A2RU54 273 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 SNX3O60493 162 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 ADRA1AP35348 466 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 ITKQ08881 620 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 SLC10A7Q0GE19 358 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 ITIH4Q14624 930 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 PCID2Q5JVF3 399 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 CCDC117Q8IWD4 279 aaPredicted RBP19.27■□□□□ 0.68
USP39-202ENST00000409025 CFAP52Q8N1V2 620 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 TEX26Q8N6G2 289 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 MFSD3Q96ES6 412 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 KLHL5Q96PQ7 755 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 CPNE1Q99829 537 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 KIFC1Q9BW19 673 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 MKS1Q9NXB0 559 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 SLC17A6Q9P2U8 582 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 SSX2IPQ9Y2D8 614 aa19.27■□□□□ 0.68
USP39-202ENST00000409025 TEX28O15482 410 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 STC2O76061 302 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 FGF18O76093 207 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms