RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 Q6ZVU0 165 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 NOP9Q86U38 636 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 TMPRSS12Q86WS5 348 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 C3orf20Q8ND61 904 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 KLHDC7BQ96G42 594 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 FEM1CQ96JP0 617 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 TBCBQ99426 244 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 HEPHQ9BQS7 1158 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 HDAC8Q9BY41 377 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 USP29Q9HBJ7 922 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 OR12D3Q9UGF7 316 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 VPS51Q9UID3 782 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 NEMP1O14524 444 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 TOR1BO14657 336 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 FGF10O15520 208 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 TSPAN6O43657 245 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 CBFA2T3O75081 653 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 PCDH8O95206 1070 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 MMEP08473 750 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 SRCP12931 536 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 GPD1P21695 349 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 HNRNPA2B1P22626 353 aaKnown RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 DUSP3P51452 185 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 E2F1Q01094 437 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 KCNMA1Q12791 1236 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 SGCGQ13326 291 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 RWDD4Q6NW29 188 aaKnown RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 ERN2Q76MJ5 926 aaKnown RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 CIR1Q86X95 450 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 PHF13Q86YI8 300 aaPredicted RBP13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 AADATQ8N5Z0 425 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 CPA5Q8WXQ8 436 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 GATA6Q92908 595 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 SLC6A18Q96N87 628 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 DUSP23Q9BVJ7 150 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 FSCN3Q9NQT6 498 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 TMEM59LQ9UK28 342 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
SNORD88B-201ENST00000408454 PI4KAP42356 2102 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 LRRC10BA6NIK2 292 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 A6NNZ2 444 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 H0Y8X5 98 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 AP1G1O43747 822 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 RNF8O76064 485 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 TPM3P06753 285 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ITGB7P26010 798 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ADRA1BP35368 520 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 FLT3P36888 993 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 NXPH1P58417 271 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 PITX1P78337 314 aaPredicted RBP13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ATP11AP98196 1134 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 PARP15Q460N3 678 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 CARD16Q5EG05 197 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 SLFN11Q7Z7L1 901 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 HORMAD1Q86X24 394 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 CHCHD4Q8N4Q1 142 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 PDCD7Q8N8D1 485 aaKnown RBP13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 GLMNQ92990 594 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ALG14Q96F25 216 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 C11orf70Q9BRQ4 267 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 GANQ9H2C0 597 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 TMEM248Q9NWD8 314 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 DKK4Q9UBT3 224 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ZMIZ1Q9ULJ6 1067 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 WDR87Q6ZQQ6 2873 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 ACACBO00763 2458 aa13.13□□□□□ -0.31
SNORD88B-201ENST00000408454 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
SNORD88B-201ENST00000408454 ENC1O14682 589 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms