RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TRIM13O60858 407 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PDE9AO76083 593 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 HOXC6P09630 235 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CYP11B1P15538 503 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 EDNRBP24530 442 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ICAM3P32942 547 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PHKA2P46019 1235 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 FSTL1Q12841 308 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PIGHQ14442 188 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CYP2A13Q16696 494 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 GPAT2Q6NUI2 795 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 NLRX1Q86UT6 975 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 HERC6Q8IVU3 1022 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CDKL3Q8IVW4 592 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 SULF1Q8IWU6 871 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 OFCC1Q8IZS5 231 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PDPRQ8NCN5 879 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 DNERQ8NFT8 737 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 NRG4Q8WWG1 115 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 UTP4Q969X6 686 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PI4K2AQ9BTU6 479 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 GANQ9H2C0 597 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 SP140LQ9H930 580 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 UCKL1Q9NWZ5 548 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 HOXC10Q9NYD6 342 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 USE1Q9NZ43 259 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 IPO11Q9UI26 975 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CCDC162PA2VCL2 907 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PRR23AA6NEV1 266 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 TMEM114B3SHH9 223 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 TRIM38O00635 465 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CNMDO75829 334 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 LYPLA2O95372 231 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 GDF11O95390 407 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CLK3P49761 638 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PRKAA2P54646 552 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 KCNK10P57789 538 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 OSTNP61366 133 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 DPYSQ14117 519 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 TTLL12Q14166 644 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ADGRE1Q14246 886 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 TGFBIQ15582 683 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 FAM47CQ5HY64 1035 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 LRRC8DQ7L1W4 858 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 SLC22A16Q86VW1 577 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ZDHHC13Q8IUH4 622 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CDAN1Q8IWY9 1227 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 CDC26Q8NHZ8 85 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 DHX38Q92620 1227 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 FAM162AQ96A26 154 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 LENG9Q96B70 501 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 HAPLN3Q96S86 360 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 YME1L1Q96TA2 773 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 MIPEPQ99797 713 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ARPC5LQ9BPX5 153 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ZSCAN5AQ9BUG6 496 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 STN1Q9H668 368 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 ACSS3Q9H6R3 686 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 FBXO40Q9UH90 709 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 TPRKBQ9Y3C4 175 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 FAM32AQ9Y421 112 aaKnown RBP5.95□□□□□ -1.46
HDAC9-203ENST00000406072 PCDHGA10Q9Y5H3 936 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 GJA3Q9Y6H8 435 aa5.95□□□□□ -1.46
HDAC9-203ENST00000406072 IGLV3-22A0A075B6J6 115 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 EFCAB10A6NFE3 127 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 SLCO1B7G3V0H7 640 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 H0YCG3 227 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 WNT7AO00755 349 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 FSCN2O14926 492 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 ALOX15BO15296 676 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 DDX3YO15523 660 aaKnown RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 SLC37A4O43826 429 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 FKBP9O95302 570 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 CRYZL1O95825 349 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 SLC25A27O95847 323 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 POLBP06746 335 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 PSAPP07602 524 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 PABPC1P11940 636 aaKnown RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 ALDH4A1P30038 563 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 HOXD11P31277 338 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 INHBCP55103 352 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 NKX3-2P78367 333 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 TRIM32Q13049 653 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 KLF10Q13118 480 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 VGLL4Q14135 290 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 FASTKQ14296 549 aaKnown RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 EPHA7Q15375 998 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 ECM1Q16610 540 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 FAM102AQ5T9C2 384 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 MFSD7Q6UXD7 560 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 FKBP9P1Q75LS8 142 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 EFL1Q7Z2Z2 1120 aaKnown RBP5.94□□□□□ -1.46
HDAC9-203ENST00000406072 HAUS6Q7Z4H7 955 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF410Q86VK4 478 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 PHC2Q8IXK0 858 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 CLIP4Q8N3C7 705 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 CBR4Q8N4T8 237 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 C7orf31Q8N865 590 aa5.94□□□□□ -1.46
HDAC9-203ENST00000406072 ASCC1Q8N9N2 400 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms