RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 DRGXA6NNA5 263 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 ETV4P43268 484 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 SERPINB9P50453 376 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 NDST2P52849 883 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 MGAT5Q09328 741 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 PACS1Q6VY07 963 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 TMEM135Q86UB9 458 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 RASSF3Q86WH2 238 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 CLP1Q92989 425 aaKnown RBP29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 MTBPQ96DY7 904 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 CERS2Q96G23 380 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 FAM111AQ96PZ2 611 aa29.51■■■□□ 2.31
CSNK1E-205ENST00000405675 DOCK4Q8N1I0 1966 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 ZCWPW2A0A1B0GU75 182 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 J3KR12 359 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 HMGA1P17096 107 aaKnown RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 CCNFP41002 786 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 NPY2RP49146 381 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 NAPEPLDQ6IQ20 393 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 KLHL23Q8NBE8 558 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 LRRC8CQ8TDW0 803 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 SRPK1Q96SB4 655 aaKnown RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 HTATIP2Q9BUP3 242 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 ALG13Q9NP73 1137 aaKnown RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 MRPL17Q9NRX2 175 aaKnown RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 USP15Q9Y4E8 981 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 MYO1CO00159 1063 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 COPEO14579 308 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 TLL1O43897 1013 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 DHRS4L1P0CG22 281 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 ANKRD20A4Q4UJ75 823 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 SPATA21Q7Z572 469 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 CHSY1Q86X52 802 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 LRRC49Q8IUZ0 686 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 OTUD6BQ8N6M0 293 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 IPMKQ8NFU5 416 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 ZNF75CPQ92670 426 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 CDKL2Q92772 493 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 MFSD3Q96ES6 412 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 ZNF512Q96ME7 567 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 RPRD1AQ96P16 312 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 PITPNM3Q9BZ71 974 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 CHRAC1Q9NRG0 131 aa29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 AAR2Q9Y312 384 aaKnown RBP29.5■■■□□ 2.31
CSNK1E-205ENST00000405675 PSMD3O43242 534 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 ALADP13716 330 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 CDH17Q12864 832 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 SPRED3Q2MJR0 410 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 ANKS4BQ8N8V4 417 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 TBL1YQ9BQ87 522 aa29.49■■■□□ 2.31
CSNK1E-205ENST00000405675 ZNF840PA6NDX5 716 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 LBHD1Q9BQE6 289 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 FICDQ9BVA6 458 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 CYP4F11Q9HBI6 524 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 DNMT3LQ9UJW3 386 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 USP1O94782 785 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 RAB33AQ14088 237 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 TPGS2Q68CL5 300 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 PHOSPHO2Q8TCD6 241 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 SP7Q8TDD2 431 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 KLHL5Q96PQ7 755 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 IL22Q9GZX6 179 aa29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 HBS1LQ9Y450 684 aaKnown RBP29.48■■■□□ 2.31
CSNK1E-205ENST00000405675 FAM237BA0A1B0GVD1 139 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 ANXA9O76027 345 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 F7P08709 466 aaPredicted RBP29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 TACR2P21452 398 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 ATP5C1P36542 298 aaKnown RBP29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 DENND5AQ6IQ26 1287 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 TIFABQ6ZNK6 161 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 LINC00523Q86TU6 105 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 CEP295NLQ96MC4 621 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 SLC13A1Q9BZW2 595 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 ZBP1Q9H171 429 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 PCMTD2Q9NV79 361 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 PHTF1Q9UMS5 762 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 SOX13Q9UN79 622 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 LILRB3O75022 631 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 CA8P35219 290 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 ADRA1AP35348 466 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 NAB1Q13506 487 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 SNX30Q5VWJ9 437 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 CCDC121Q6ZUS5 278 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 CCT6BQ92526 530 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 PTPRN2Q92932 1015 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 VPS11Q9H270 941 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 ZFATQ9P243 1243 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 PRKAG3Q9UGI9 489 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 YIPF1Q9Y548 306 aa29.47■■■□□ 2.31
CSNK1E-205ENST00000405675 CCT8L1PA6NM43 557 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 TEX28O15482 410 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 NMBRP28336 390 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 SLC6A4P31645 630 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 KPNA1P52294 538 aaPredicted RBP29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 ANO4Q32M45 955 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 PSMG2Q969U7 264 aa29.46■■■□□ 2.31
CSNK1E-205ENST00000405675 COCHO43405 550 aa29.45■■■□□ 2.31
CSNK1E-205ENST00000405675 EDF1O60869 148 aaKnown RBP29.45■■■□□ 2.31
CSNK1E-205ENST00000405675 PMPCBO75439 489 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms