RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMEM105Q8N8V8 129 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 P3H4Q92791 437 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 OSBPL6Q9BZF3 934 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 PDFQ9HBH1 243 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 HPCAL4Q9UM19 191 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 R3HDM2Q9Y2K5 976 aaKnown RBP16.28■□□□□ 0.2
HMGA1-204ENST00000401473 PRAMEF11O60813 436 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 PEX11BO96011 259 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 FGGP02679 453 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 PRLRP16471 622 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 TGM2P21980 687 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 IL12RB1P42701 662 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 NR2C2P49116 596 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 SULT2A1Q06520 285 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 ENPP2Q13822 863 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 DGKKQ5KSL6 1271 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 ALLCQ8N6M5 410 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF366Q8N895 744 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 RPLP0P6Q8NHW5 317 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 ACTL9Q8TC94 416 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 PBKQ96KB5 322 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 C2orf42Q9NWW7 574 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 SMARCAL1Q9NZC9 954 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 HS3ST2Q9Y278 367 aa16.27■□□□□ 0.2
HMGA1-204ENST00000401473 ADAM23O75077 832 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 ZNF821O75541 412 aaPredicted RBP16.27■□□□□ 0.19
HMGA1-204ENST00000401473 SRCP12931 536 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 WASP42768 502 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 CLCN5P51795 746 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.19
HMGA1-204ENST00000401473 SIX1Q15475 284 aaPredicted RBP16.27■□□□□ 0.19
HMGA1-204ENST00000401473 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.19
HMGA1-204ENST00000401473 CHPFQ8IZ52 775 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 FBXL6Q8N531 539 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 SH2D3CQ8N5H7 860 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 ZNF419Q96HQ0 510 aaPredicted RBP16.27■□□□□ 0.19
HMGA1-204ENST00000401473 MTG2Q9H4K7 406 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.19
HMGA1-204ENST00000401473 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
HMGA1-204ENST00000401473 FRYLO94915 3013 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 TTC34A8MYJ7 566 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 SGK1O00141 431 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 ASLP04424 464 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 HLA-EP13747 358 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 VAV1P15498 845 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 CASQ1P31415 396 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 MRPS21P82921 87 aaKnown RBP16.26■□□□□ 0.19
HMGA1-204ENST00000401473 SYNPOQ8N3V7 929 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 ATP11CQ8NB49 1132 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 TXNDC5Q8NBS9 432 aaKnown RBP16.26■□□□□ 0.19
HMGA1-204ENST00000401473 CCNYQ8ND76 341 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 KCNV2Q8TDN2 545 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 FRS2Q8WU20 508 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 UCMAQ8WVF2 138 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 HDAC11Q96DB2 347 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 TSGA13Q96PP4 275 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
HMGA1-204ENST00000401473 SRPRAP08240 638 aaKnown RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 MX2P20592 715 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 IL10RBQ08334 325 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 SLC20A2Q08357 652 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 SLC10A7Q0GE19 358 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 NOMO1Q15155 1222 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 DLG2Q15700 870 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CCDC181Q5TID7 509 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 RETSATQ6NUM9 610 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 LRRC49Q8IUZ0 686 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 PTPRN2Q92932 1015 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 ERLEC1Q96DZ1 483 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 TTC7AQ9ULT0 858 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 FCF1Q9Y324 198 aaKnown RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 STON1Q9Y6Q2 735 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CKAP5Q14008 2032 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 PRR33A8MZF0 331 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CES2O00748 559 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 NCAM2O15394 837 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 ATP9BO43861 1147 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 KLF8O95600 359 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 TCP1P17987 556 aaKnown RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 PRKCHP24723 683 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CCNCP24863 283 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 NTSR1P30989 418 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 SERPINH1P50454 418 aaKnown RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 VASPP50552 380 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 PPIDQ08752 370 aaKnown RBP16.25■□□□□ 0.19
HMGA1-204ENST00000401473 LRRC32Q14392 662 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 PDK1Q15118 436 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 CYTH1Q15438 398 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 TMEM31Q5JXX7 168 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 ATG4AQ8WYN0 398 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 C1QTNF1Q9BXJ1 281 aa16.25■□□□□ 0.19
HMGA1-204ENST00000401473 SLC25A13Q9UJS0 675 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms