RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 KIAA1524Q8TCG1 905 aa18.55■□□□□ 0.56
SBF1-203ENST00000399627 FAF2Q96CS3 445 aa18.55■□□□□ 0.56
SBF1-203ENST00000399627 ZNF830Q96NB3 372 aaPredicted RBP18.55■□□□□ 0.56
SBF1-203ENST00000399627 TSGA10Q9BZW7 698 aa18.55■□□□□ 0.56
SBF1-203ENST00000399627 MKRN2Q9H000 416 aaKnown RBP18.55■□□□□ 0.56
SBF1-203ENST00000399627 GUCA1BQ9UMX6 200 aa18.55■□□□□ 0.56
SBF1-203ENST00000399627 PCDHGA2Q9Y5H1 932 aa18.55■□□□□ 0.56
SBF1-203ENST00000399627 TARSL2A2RTX5 802 aaKnown RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 ARHGAP42A6NI28 874 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 C3orf70A6NLC5 250 aaPredicted RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 DFFAO00273 331 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 CD160O95971 181 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 MARCKSL1P49006 195 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 SERPINH1P50454 418 aaKnown RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 PAPOLAP51003 745 aaKnown RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 COPAP53621 1224 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 SLC20A2Q08357 652 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 C9orf64Q5T6V5 341 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 KIAA1324Q6UXG2 1013 aaKnown RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 TMPRSS6Q8IU80 811 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 TP53INP2Q8IXH6 220 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 LZTR1Q8N653 840 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 KRT35Q92764 455 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 PTPRN2Q92932 1015 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 RNF25Q96BH1 459 aaPredicted RBP18.54■□□□□ 0.56
SBF1-203ENST00000399627 MRGPRX1Q96LB2 322 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 KCNF1Q9H3M0 494 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 PLXND1Q9Y4D7 1925 aa18.54■□□□□ 0.56
SBF1-203ENST00000399627 NUMA1Q14980 2115 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 KRT86O43790 486 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 PALMO75781 387 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 CLCN6P51797 869 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 SRSF5Q13243 272 aaKnown RBP18.53■□□□□ 0.56
SBF1-203ENST00000399627 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 C22orf39Q6P5X5 142 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 Q6ZVU0 165 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 CACUL1Q86Y37 369 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 STK40Q8N2I9 435 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
SBF1-203ENST00000399627 PQLC3Q8N755 202 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 RNF157Q96PX1 679 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 FBRSQ9HAH7 460 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 PRDM16Q9HAZ2 1276 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 FCF1Q9Y324 198 aaKnown RBP18.53■□□□□ 0.56
SBF1-203ENST00000399627 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 GON4LQ3T8J9 2241 aa18.53■□□□□ 0.56
SBF1-203ENST00000399627 THADAQ6YHU6 1953 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 CXorf51AA0A1B0GTR3 108 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 ZSCAN5CA6NGD5 496 aaPredicted RBP18.52■□□□□ 0.56
SBF1-203ENST00000399627 ZNF487B1APH4 448 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 J3KR12 359 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 HRO43593 1189 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 LILRB5O75023 590 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 SERPINB6P35237 376 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 GEMIN4P57678 1058 aaKnown RBP18.52■□□□□ 0.56
SBF1-203ENST00000399627 NCBP2-AS2Q69YL0 99 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 ZC3H14Q6PJT7 736 aaKnown RBP18.52■□□□□ 0.56
SBF1-203ENST00000399627 MFSD7Q6UXD7 560 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 ARHGAP36Q6ZRI8 547 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 NT5DC3Q86UY8 548 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 VSIG1Q86XK7 387 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 KATNAL2Q8IYT4 538 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 SIPA1Q96FS4 1042 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 FAM129BQ96TA1 746 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 TNKS2Q9H2K2 1166 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 INVSQ9Y283 1065 aa18.52■□□□□ 0.56
SBF1-203ENST00000399627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
SBF1-203ENST00000399627 CEP192Q8TEP8 1941 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 MFSD11O43934 449 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 BNIP3LO60238 219 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 PRAMEF11O60813 436 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 FTCDO95954 541 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 CTNNA2P26232 953 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 CTNNA1P35221 906 aaKnown RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 RPS14P62263 151 aaKnown RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 PAFAH1B3Q15102 231 aaKnown RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 USP39Q53GS9 565 aaKnown RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 ZNF776Q68DI1 518 aaPredicted RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 ZNF662Q6ZS27 426 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 PEX26Q7Z412 305 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 SYCE1Q8N0S2 351 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 RLN3Q8WXF3 142 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 PRCCQ92733 491 aaPredicted RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 CEP44Q9C0F1 390 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 RSPH9Q9H1X1 276 aaPredicted RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 PDFQ9HBH1 243 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 UBA2Q9UBT2 640 aaPredicted RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 IPO11Q9UI26 975 aaKnown RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 AMFRQ9UKV5 643 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 ARIH1Q9Y4X5 557 aaPredicted RBP18.51■□□□□ 0.55
SBF1-203ENST00000399627 PCDHA3Q9Y5H8 950 aa18.51■□□□□ 0.55
SBF1-203ENST00000399627 ZNF821O75541 412 aaPredicted RBP18.5■□□□□ 0.55
SBF1-203ENST00000399627 TMCC1O94876 653 aa18.5■□□□□ 0.55
SBF1-203ENST00000399627 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.55
SBF1-203ENST00000399627 CDKN2BP42772 138 aa18.5■□□□□ 0.55
SBF1-203ENST00000399627 DNA2P51530 1060 aa18.5■□□□□ 0.55
SBF1-203ENST00000399627 NHLH1Q02575 133 aa18.5■□□□□ 0.55
SBF1-203ENST00000399627 ELAVL3Q14576 367 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms