RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ILKAPQ9H0C8 392 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 PORCNQ9H237 461 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 EPB41L1Q9H4G0 881 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 AURKCQ9UQB9 309 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 GMEB1Q9Y692 573 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 MMP10P09238 476 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 KCNA2P16389 499 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 ARL13AQ5H913 290 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 EEF1DP3Q658K8 133 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 SEL1L3Q68CR1 1132 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 WDR49Q8IV35 697 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 TP53INP2Q8IXH6 220 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 LRRC43Q8N309 656 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 KDF1Q8NAX2 398 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 SLC4A11Q8NBS3 891 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 TRAPPC12Q8WVT3 735 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 HAUS8Q9BT25 410 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 YIPF2Q9BWQ6 316 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 RPAP3Q9H6T3 665 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF696Q9H7X3 374 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 UBR3Q6ZT12 1888 aa10.06□□□□□ -0.8
PTCHD4-202ENST00000398738 TRIM43BA6NCK2 446 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 VAPBO95292 243 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NFICP08651 508 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GNAO1P09471 354 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PSMB4P28070 264 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NAMPTP43490 491 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CCDC14Q49A88 953 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 LRRC8EQ6NSJ5 796 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 C16orf87Q6PH81 154 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ZBTB8BQ8NAP8 495 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ADCY4Q8NFM4 1077 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 OR52K1Q8NGK4 314 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 XYLT2Q9H1B5 865 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 MOCS1Q9NZB8 636 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CCDC167Q9P0B6 97 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CIDEBQ9UHD4 219 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 MYRFQ9Y2G1 1151 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 AP4S1Q9Y587 144 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 C2CD4BA6NLJ0 364 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF839A8K0R7 811 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 C9JVG2 144 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NRP1O14786 923 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 AP1G1O43747 822 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ICMTO60725 284 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 TRIM13O60858 407 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 TFEBP19484 476 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GRIA4P48058 902 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF460Q14592 562 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 TAZQ16635 292 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PPP1R26Q5T8A7 1209 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 MAP1SQ66K74 1059 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ZBTB49Q6ZSB9 765 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CYP4V2Q6ZWL3 525 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PID1Q7Z2X4 250 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM131BQ86XD5 332 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 SMYD1Q8NB12 490 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CLEC4CQ8WTT0 213 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 TMEM176AQ96HP8 235 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GTSE1Q9NYZ3 720 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ZDHHC2Q9UIJ5 367 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 TSPAN16Q9UKR8 245 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PCDHB12Q9Y5F1 795 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CROCCQ5TZA2 2017 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 LILRA1O75019 489 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 H6PDO95479 791 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PRKCBP05771 671 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ASNSP08243 561 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 COL6A2P12110 1019 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GPD2P43304 727 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 YAP1P46937 504 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 RXRGP48443 463 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ESRRGP62508 458 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 DGKDQ16760 1214 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 PIGGQ5H8A4 983 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 GPR141Q7Z602 305 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 ERI1Q8IV48 349 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 CDKL3Q8IVW4 592 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 FNIP1Q8TF40 1166 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NDRG1Q92597 394 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 MFSD3Q96ES6 412 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 SOX17Q9H6I2 414 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 DHX33Q9H6R0 707 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 EFCAB1Q9HAE3 211 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 NMRAL1Q9HBL8 299 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 V9GYQ6 96 aa10.05□□□□□ -0.8
PTCHD4-202ENST00000398738 A0A1W2PPW3 197 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 PSMD12O00232 456 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 C2P06681 752 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 HNRNPLP14866 589 aaKnown RBP eCLIP10.04□□□□□ -0.86e-7■■□□□ 13.5
PTCHD4-202ENST00000398738 GOT1P17174 413 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 IGBP1P78318 339 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms