RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDH17Q12864 832 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 ZCCHC8Q6NZY4 707 aaKnown RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 DNAJC14Q6Y2X3 702 aaPredicted RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 CDK20Q8IZL9 346 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 CPA6Q8N4T0 437 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 DNAJC18Q9H819 358 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 GPN3Q9UHW5 284 aaPredicted RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 VHLP40337 213 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM228AQ86W67 206 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 MAB21L3Q8N8X9 362 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 PRKAG3Q9UGI9 489 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 MPOP05164 745 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 PFKMP08237 780 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 SLC1A6P48664 564 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 NCF4Q15080 339 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 RASA2Q15283 850 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 CCNG2Q16589 344 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 UNC93AQ86WB7 457 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 FBXO25Q8TCJ0 367 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 C18orf25Q96B23 403 aaPredicted RBP14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 BPIFA1Q9NP55 256 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
PCDHA11-201ENST00000398640 DUOX1Q9NRD9 1551 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 SAC3D1A6NKF1 404 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 BTN3A1O00481 513 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 USP12O75317 370 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 KRT6AP02538 564 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 KRT6BP04259 564 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 SERPINB1P30740 379 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 SOX6P35712 828 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 FLT3P36888 993 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 ELK3P41970 407 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 MMP13P45452 471 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 KRT6CP48668 564 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 PLK1P53350 603 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 ATAD3BQ5T9A4 648 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 HAS1Q92839 578 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 NXF3Q9H4D5 531 aaKnown RBP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 ARMC7Q9H6L4 198 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A1W2PQ45 241 aaPredicted RBP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A1W2PQY0 241 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 GSAPA4D1B5 854 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 TMEM114B3SHH9 223 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 B4GALT5O43286 388 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 TRIM71Q2Q1W2 868 aaKnown RBP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 ANKRD7Q92527 254 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 GMLQ99445 158 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 NAT9Q9BTE0 207 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 TMBIM4Q9HC24 238 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 PLIN4Q96Q06 1357 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 CNTFP26441 200 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 OSCP1Q8WVF1 389 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 POPDC2Q9HBU9 364 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 KLHL28Q9NXS3 571 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 GULP1Q9UBP9 304 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 IL5RAQ01344 420 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 SMARCB1Q12824 385 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM9CQ8IZT9 166 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 LRRN4Q8WUT4 740 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 WASP42768 502 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 PSEN1P49768 467 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 TARBP2Q15633 366 aaKnown RBP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 MACC1Q6ZN28 852 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 MILR1Q7Z6M3 343 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 HNRNPLLQ8WVV9 542 aaKnown RBP14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 POLG2Q9UHN1 485 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 C2CD2Q9Y426 696 aa14.44□□□□□ -0.1
PCDHA11-201ENST00000398640 ABHD14A-ACY1A0A1B0GW23 586 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 NEDD8-MDP1E9PL57 170 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 MCL1Q07820 350 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 DDR2Q16832 855 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ZC3H12AQ5D1E8 599 aaKnown RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 FIGNQ5HY92 759 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 AADACL2Q6P093 401 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 GPR141Q7Z602 305 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ELMO1Q92556 727 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 INSL6Q9Y581 213 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 E5RJQ4 531 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 CAPN1P07384 714 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 PSMC3P17980 439 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 GABRR2P28476 465 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 TTC7BQ86TV6 843 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 PARGQ86W56 976 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ETNPPLQ8TBG4 499 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ARHGAP20Q9P2F6 1191 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF214Q9UL59 606 aaPredicted RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 KRT33AO76009 404 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ADH1CP00326 375 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 SNRPD1P62314 119 aaKnown RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 FGD3Q5JSP0 725 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 GRTP1Q5TC63 336 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 EPHX4Q8IUS5 362 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 DBF4BQ8NFT6 615 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 DERAQ9Y315 318 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ALS2Q96Q42 1657 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms