RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TRIM13O60858 407 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 FYNP06241 537 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 AP2B1P63010 937 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 TEDDM1Q5T9Z0 273 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMEM198Q66K66 360 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 LRRTM3Q86VH5 581 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 SHKBP1Q8TBC3 707 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 GIPC2Q8TF65 315 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 CENPIQ92674 756 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 SKA1Q96BD8 255 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ILKAPQ9H0C8 392 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 SARS2Q9NP81 518 aaKnown RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 NDFIP2Q9NV92 336 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 MOCS1Q9NZB8 636 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 IPO11Q9UI26 975 aaKnown RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ANGPTL2Q9UKU9 493 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 HNRNPCL1O60812 293 aaKnown RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CNTFP26441 200 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PMLP29590 882 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 GRIA4P48058 902 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 OCRLQ01968 901 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRIP10Q15642 601 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ALKAL1Q6UXT8 129 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 IZUMO2Q6UXV1 221 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CCNJLQ8IV13 435 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CASP10Q92851 521 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 EXOC2Q96KP1 924 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 C7orf26Q96N11 449 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TBL1YQ9BQ87 522 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 IL1RL2Q9HB29 575 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PNPLA8Q9NP80 782 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ACOT9Q9Y305 439 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 MBLAC1A4D2B0 266 aaPredicted RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SIN3BO75182 1162 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CRCPO75575 148 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 LUC7L3O95232 432 aaKnown RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CHRNA1P02708 482 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 DHRS4L1P0CG22 281 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CD86P42081 329 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC34A1Q06495 639 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CRHR2Q13324 411 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PCLAFQ15004 111 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 KCNA10Q16322 511 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PSMD5Q16401 504 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 RAP1GAP2Q684P5 730 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 HPS6Q86YV9 775 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CFAP52Q8N1V2 620 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF276Q8N554 614 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 HDAC11Q96DB2 347 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PPP1R10Q96QC0 940 aaKnown RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 MLPHQ9BV36 600 aaPredicted RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 XPR1Q9UBH6 696 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SOX13Q9UN79 622 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 GABRQQ9UN88 632 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 DOCK3Q8IZD9 2030 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ATP6AP2A0A1C7CYW4 349 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC12A8A0AV02 714 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMEM233B4DJY2 109 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TIMM44O43615 452 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SMIM24O75264 130 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ATP6AP2O75787 350 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 KLHL2O95198 593 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 PRKCGP05129 697 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 IRF1P10914 325 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 STMN1P16949 149 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CASP2P42575 452 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 DNAL1Q4LDG9 190 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC9B1Q4ZJI4 515 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 ACAD11Q709F0 780 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 MARK2Q7KZI7 788 aaKnown RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SNX32Q86XE0 403 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMEM86AQ8N2M4 240 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 OR10T2Q8NGX3 314 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 NXNL1Q96CM4 212 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 RBBP8Q99708 897 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 GATA5Q9BWX5 397 aaPredicted RBP10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 CATSPERBQ9H7T0 1116 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 EBF2Q9HAK2 575 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 SIRPGQ9P1W8 387 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 AK5Q9Y6K8 562 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 RLFQ13129 1914 aa10.61□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAM95CA0A1B0GW59 222 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 DCLK1O15075 740 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 TGDSO95455 350 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 FGF3P11487 239 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 CD68P34810 354 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 GLUD2P49448 558 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 TBL3Q12788 808 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC12A1Q13621 1099 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 FSCBQ5H9T9 825 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAM171A1Q5VUB5 890 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMC7Q7Z402 723 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms