RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 GPR27Q9NS67 375 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 SLC12A6Q9UHW9 1150 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 PCDHB4Q9Y5E5 795 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 CSNK1G3Q9Y6M4 447 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 PIEZO2Q9H5I5 2752 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 TRPM6Q9BX84 2022 aa15.36■□□□□ 0.05
SEC13-206ENST00000397102 CPED1A4D0V7 1026 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 EME2A4GXA9 379 aaPredicted RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 H3BM21 787 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 RNF225M0QZC1 329 aaPredicted RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 BNIP3LO60238 219 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 TRUB2O95900 331 aaKnown RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 CTSLP07711 333 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 ZSCAN23Q3MJ62 389 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 ZNF542PQ5EBM4 170 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 GUSBP11Q6P575 273 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 XKR5Q6UX68 686 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 Q6ZSR6 202 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 EFL1Q7Z2Z2 1120 aaKnown RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 PTAR1Q7Z6K3 402 aaPredicted RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 EXD3Q8N9H8 876 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 WDR36Q8NI36 951 aaKnown RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 RNF34Q969K3 372 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 ARRDC3Q96B67 414 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 CCNL2Q96S94 520 aaPredicted RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 FEM1AQ9BSK4 669 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 TRIM4Q9C037 500 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 POPDC2Q9HBU9 364 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 DYRK4Q9NR20 520 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 ST7Q9NRC1 585 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.35■□□□□ 0.05
SEC13-206ENST00000397102 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 SALL4Q9UJQ4 1053 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 ZFR2Q9UPR6 939 aaKnown RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
SEC13-206ENST00000397102 HS3ST3A1Q9Y663 406 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 RP1P56715 2156 aa15.35■□□□□ 0.05
SEC13-206ENST00000397102 KPNA3O00505 521 aaPredicted RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 TERTO14746 1132 aaKnown RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 SLC16A3O15427 465 aaKnown RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 CSF2P04141 144 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 NME1P15531 152 aaKnown RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 CHRNA3P32297 505 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 SYKP43405 635 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 ACADSBP45954 432 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 DNM1Q05193 864 aaKnown RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 EIF4EBP2Q13542 120 aaPredicted RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 FZD2Q14332 565 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 TMEM259Q4ZIN3 620 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 OR6B2Q6IFH4 312 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 FOXR1Q6PIV2 292 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 KYAT3Q6YP21 454 aaKnown RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 PARGQ86W56 976 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 TMIEQ8NEW7 156 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 OR52K2Q8NGK3 314 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 BMFQ96LC9 184 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 CCDC114Q96M63 670 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 VPS28Q9UK41 221 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
SEC13-206ENST00000397102 HS3ST2Q9Y278 367 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 OR51B4Q9Y5P0 310 aa15.34■□□□□ 0.05
SEC13-206ENST00000397102 CCDC187A0A096LP49 1063 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 SPTY2D1-AS1A0A0U1RR47 76 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 PMS2P1A4D2B8 440 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 AQP9O43315 295 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 TNFSF15O95150 251 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 PCDH8O95206 1070 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 CALCAP01258 141 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 PRNPP04156 253 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
SEC13-206ENST00000397102 ITGA2BP08514 1039 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 SLC2A3P11169 496 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 SRCP12931 536 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 GPD2P43304 727 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 CENPCQ03188 943 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 NR0B2Q15466 257 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 LINC00303Q3SY05 128 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 C6orf132Q5T0Z8 1188 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 SEL1L3Q68CR1 1132 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 FBXL22Q6P050 247 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 ERN2Q76MJ5 926 aaKnown RBP15.33■□□□□ 0.04
SEC13-206ENST00000397102 LURAP1LQ8IV03 231 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 OR2A12Q8NGT7 310 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 WDR48Q8TAF3 677 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 RPRD1AQ96P16 312 aaPredicted RBP15.33■□□□□ 0.04
SEC13-206ENST00000397102 NT5C1BQ96P26 610 aa15.33■□□□□ 0.04
SEC13-206ENST00000397102 POM121BA6NF01 834 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 TPP1O14773 563 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 YWHAZP63104 245 aaKnown RBP15.32■□□□□ 0.04
SEC13-206ENST00000397102 PITX1P78337 314 aaPredicted RBP15.32■□□□□ 0.04
SEC13-206ENST00000397102 DEFB133Q30KQ1 61 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 PERM1Q5SV97 790 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 CRTC1Q6UUV9 634 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 ATG14Q6ZNE5 492 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 SMYD4Q8IYR2 804 aaPredicted RBP15.32■□□□□ 0.04
SEC13-206ENST00000397102 PPM1KQ8N3J5 372 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 STK32AQ8WU08 396 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 SRRTQ9BXP5 876 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms