RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NOL6Q9H6R4 1146 aaKnown RBP15.23■□□□□ 0.03
CBX3-202ENST00000396386 RBM22Q9NW64 420 aaKnown RBP eCLIP15.23■□□□□ 0.031e-7■■■□□ 18
CBX3-202ENST00000396386 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
CBX3-202ENST00000396386 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
CBX3-202ENST00000396386 CHKBQ9Y259 395 aa15.23■□□□□ 0.03
CBX3-202ENST00000396386 MRPL42Q9Y6G3 142 aaKnown RBP15.23■□□□□ 0.03
CBX3-202ENST00000396386 IGLV3-10A0A075B6K4 115 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 SLC12A8A0AV02 714 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 TGDSO95455 350 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 MT-CYBP00156 380 aaPredicted RBP15.22■□□□□ 0.03
CBX3-202ENST00000396386 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
CBX3-202ENST00000396386 TPH1P17752 444 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 SKIV2L2P42285 1042 aaKnown RBP15.22■□□□□ 0.03
CBX3-202ENST00000396386 LIMK2P53671 638 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 TMPRSS15P98073 1019 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 RING1Q06587 406 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 RASIP1Q5U651 963 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 NLRP9Q7RTR0 991 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 STRA8Q7Z7C7 330 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 NUDCD3Q8IVD9 361 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 FATE1Q969F0 183 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 E2F7Q96AV8 911 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 MFSD3Q96ES6 412 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 KIFC1Q9BW19 673 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 FSD1LQ9BXM9 530 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 C20orf96Q9NUD7 363 aaPredicted RBP15.22■□□□□ 0.03
CBX3-202ENST00000396386 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 NSMCE4AQ9NXX6 385 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 OGDHLQ9ULD0 1010 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 CDY1Q9Y6F8 540 aa15.22■□□□□ 0.03
CBX3-202ENST00000396386 CCDC195A0A1B0GUA6 201 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 SLC38A8A6NNN8 435 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 RASSF9O75901 435 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 TBX18O95935 607 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 BPGMP07738 259 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 CSE1LP55060 971 aaKnown RBP15.21■□□□□ 0.03
CBX3-202ENST00000396386 CCL23P55773 120 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 DUSP4Q13115 394 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 MTA1Q13330 715 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 PDE1CQ14123 709 aaPredicted RBP15.21■□□□□ 0.03
CBX3-202ENST00000396386 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 PCID2Q5JVF3 399 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 TEDDM1Q5T9Z0 273 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 RAP1GAP2Q684P5 730 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 PDPK2PQ6A1A2 396 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 CCDC117Q8IWD4 279 aaPredicted RBP15.21■□□□□ 0.03
CBX3-202ENST00000396386 PPHLN1Q8NEY8 458 aaKnown RBP15.21■□□□□ 0.03
CBX3-202ENST00000396386 RFWD2Q8NHY2 731 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 ISL2Q96A47 359 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 HMCESQ96FZ2 354 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 C7orf26Q96N11 449 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 SP110Q9HB58 689 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 ENTPD7Q9NQZ7 604 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 CHRAC1Q9NRG0 131 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 MTRRQ9UBK8 725 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 DCDC2Q9UHG0 476 aa15.21■□□□□ 0.03
CBX3-202ENST00000396386 TIMM44O43615 452 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 TOP3BO95985 862 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 HMBSP08397 361 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 ZDHHC11BP0C7U3 371 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 NMBRP28336 390 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 MAGEA12P43365 314 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 KPNA1P52294 538 aaPredicted RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 MPP3Q13368 585 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 INSCQ1MX18 579 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 HSP90AA5PQ58FG0 334 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 N4BP2L1Q5TBK1 243 aaPredicted RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 TAS1R1Q7RTX1 841 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 CCDC91Q7Z6B0 441 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 DCLK2Q8N568 766 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 GIPC2Q8TF65 315 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 PTCD2Q8WV60 388 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 CDK5RAP1Q96SZ6 601 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 TTLL2Q9BWV7 592 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 SNX15Q9NRS6 342 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 DCTN4Q9UJW0 460 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 COL4A6Q14031 1691 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 TLR5O60602 858 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 CNTN5O94779 1100 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 ATF6P18850 670 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 TYK2P29597 1187 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 ADRA1AP35348 466 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 RENBPP51606 427 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 ATN1P54259 1190 aaPredicted RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 BST1Q10588 318 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 HNRNPDQ14103 355 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 ALFQ53S48 1182 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 SPDYAQ5MJ70 313 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 FBXL22Q6P050 247 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 ANKRD33Q7Z3H0 272 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 MRM3Q9HC36 420 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 IARS2Q9NSE4 1012 aaKnown RBP15.2■□□□□ 0.02
CBX3-202ENST00000396386 EMCNQ9ULC0 261 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms