RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 MRM3Q9HC36 420 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 IARS2Q9NSE4 1012 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 CHCHD3Q9NX63 227 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 RUVBL2Q9Y230 463 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 MYRFQ9Y2G1 1151 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 AP4S1Q9Y587 144 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 TSPAN1O60635 241 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 ANXA9O76027 345 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 GJB1P08034 283 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 FAM163BP0C2L3 166 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 ATP6V1B1P15313 513 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 TAF6P49848 677 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 NUP107P57740 925 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 TUBA4AP68366 448 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 PPIDQ08752 370 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 SQLEQ14534 574 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 NADK2Q4G0N4 442 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 KLHDC10Q6PID8 442 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 CATSPER4Q7RTX7 472 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 PCYOX1LQ8NBM8 494 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 AGR3Q8TD06 166 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 TMA16Q96EY4 203 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 TSPAN17Q96FV3 270 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 TRPV6Q9H1D0 765 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 MRPL46Q9H2W6 279 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 PNPLA3Q9NST1 481 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 IRAK4Q9NWZ3 460 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 RIMS3Q9UJD0 308 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 COL4A5P29400 1685 aa8.4□□□□□ -1.06
BDNF-206ENST00000395983 MYO18AQ92614 2054 aaKnown RBP8.4□□□□□ -1.06
BDNF-206ENST00000395983 LCTP09848 1927 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 MPSTP25325 297 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 PTPN3P26045 913 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 EPHA3P29320 983 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 NAGLUP54802 743 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 SOWAHAQ2M3V2 549 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 USP41Q3LFD5 358 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 ARL13AQ5H913 290 aaPredicted RBP8.4□□□□□ -1.07
BDNF-206ENST00000395983 SAMD4BQ5PRF9 694 aaKnown RBP8.4□□□□□ -1.07
BDNF-206ENST00000395983 TNIP2Q8NFZ5 429 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 TSPAN14Q8NG11 270 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 CALML6Q8TD86 181 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 MRPL57Q9BQC6 102 aaKnown RBP8.4□□□□□ -1.07
BDNF-206ENST00000395983 SLC25A23Q9BV35 468 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 UNC93B1Q9H1C4 597 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 APPL1Q9UKG1 709 aa8.4□□□□□ -1.07
BDNF-206ENST00000395983 PRSS51A0A1B0GVH4 220 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 SRP72O76094 671 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 VAPBO95292 243 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 ARIH2O95376 493 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 LGALS2P05162 132 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 TFAP2AP05549 437 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 SMIM18P0DKX4 95 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 HSPA1AP0DMV8 641 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 HSPA1BP0DMV9 641 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 XRCC1P18887 633 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 AXLP30530 894 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 TTKP33981 857 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 RAB15P59190 212 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 TRIM25Q14258 630 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 FAM83EQ2M2I3 478 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 IRAK1BP1Q5VVH5 260 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 LRRC8EQ6NSJ5 796 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 PRMT9Q6P2P2 845 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 FBXL19Q6PCT2 694 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 CES3Q6UWW8 571 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 SLC22A9Q8IVM8 553 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 GALNT4Q8N4A0 578 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 CCNYL1Q8N7R7 359 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 HM13Q8TCT9 377 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 STYXQ8WUJ0 223 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 HDAC11Q96DB2 347 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 SNX27Q96L92 541 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 GTSE1Q9NYZ3 720 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 SLC17A6Q9P2U8 582 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 RSL24D1Q9UHA3 163 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 G3BP2Q9UN86 482 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 FAF1Q9UNN5 650 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 TRMUO75648 421 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 ATP5F1P24539 256 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 RAB10P61026 200 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 PSME3P61289 254 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 PCID2Q5JVF3 399 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 RNF111Q6ZNA4 994 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 ERO1BQ86YB8 467 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 KCTD13Q8WZ19 329 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 PPWD1Q96BP3 646 aaKnown RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 RMND5BQ96G75 393 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 MED10Q9BTT4 135 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 WDR55Q9H6Y2 383 aaPredicted RBP8.39□□□□□ -1.07
BDNF-206ENST00000395983 SPAG4Q9NPE6 437 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 GDAP2Q9NXN4 497 aa8.39□□□□□ -1.07
BDNF-206ENST00000395983 IPO11Q9UI26 975 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms