RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZNF18P17022 549 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 MAT2AP31153 395 aaKnown RBP18.47■□□□□ 0.55
CXCL12-204ENST00000395793 NXPH1P58417 271 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 CDR2Q01850 454 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 PIP5KL1Q5T9C9 394 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 NAPEPLDQ6IQ20 393 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 LRSAM1Q6UWE0 723 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 ARCQ7LC44 396 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 SETD3Q86TU7 594 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-204ENST00000395793 SPATS2Q86XZ4 545 aaKnown RBP18.47■□□□□ 0.55
CXCL12-204ENST00000395793 CHST14Q8NCH0 376 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 JOSD2Q8TAC2 188 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 ARRDC3Q96B67 414 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 PCDHB18PQ96TA0 734 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 FANCLQ9NW38 375 aa18.47■□□□□ 0.55
CXCL12-204ENST00000395793 DMXL2Q8TDJ6 3036 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 C1QTNF3-AMACRE9PGA6 284 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 CBX4O00257 560 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 SRGAP2O75044 1071 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 ZMPSTE24O75844 475 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 MMP8P22894 467 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 SOX5P35711 763 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 KRT83P78385 493 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 ATP11AP98196 1134 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 SCAPQ12770 1279 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 PTP4A2Q12974 167 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 C15orf59Q2T9L4 293 aaPredicted RBP18.46■□□□□ 0.55
CXCL12-204ENST00000395793 FAM46CQ5VWP2 391 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 C22orf39Q6P5X5 142 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 LRRC31Q6UY01 552 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 ZNF677Q86XU0 584 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 ATP11CQ8NB49 1132 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 SLC30A5Q8TAD4 765 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 HAPLN3Q96S86 360 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 C11orf70Q9BRQ4 267 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 C2orf49Q9BVC5 232 aaPredicted RBP18.46■□□□□ 0.55
CXCL12-204ENST00000395793 MAGEB5Q9BZ81 275 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 KDM4CQ9H3R0 1056 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 CA5BQ9Y2D0 317 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 PAXBP1Q9Y5B6 917 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 FAM208BQ5VWN6 2430 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 GOLGA4Q13439 2230 aaKnown RBP18.46■□□□□ 0.55
CXCL12-204ENST00000395793 ZFYVE26Q68DK2 2539 aa18.46■□□□□ 0.55
CXCL12-204ENST00000395793 TNFSF14O43557 240 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 ZNF821O75541 412 aaPredicted RBP18.45■□□□□ 0.54
CXCL12-204ENST00000395793 OR1E1P30953 314 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 CHRNA3P32297 505 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 COPB1P53618 953 aaKnown RBP18.45■□□□□ 0.54
CXCL12-204ENST00000395793 SYCP1Q15431 976 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 CDO1Q16878 200 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 MANEALQ5VSG8 457 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 TMPRSS7Q7RTY8 843 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 MSANTD4Q8NCY6 345 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 SAP25Q8TEE9 199 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 RXFP2Q8WXD0 754 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 TNKS2Q9H2K2 1166 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 GDF3Q9NR23 364 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 NEU3Q9UQ49 428 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 ACTL7AQ9Y615 435 aa18.45■□□□□ 0.54
CXCL12-204ENST00000395793 FREM2Q5SZK8 3169 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 ILVBLA1L0T0 632 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 FAM72CH0Y354 149 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 TLR4O00206 839 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 DFNA5O60443 496 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 EPHA8P29322 1005 aaPredicted RBP18.44■□□□□ 0.54
CXCL12-204ENST00000395793 ARF5P84085 180 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 C6orf118Q5T5N4 469 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 FAM72AQ5TYM5 149 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 FAM72DQ6L9T8 149 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 KANSL1Q7Z3B3 1105 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 PRPF39Q86UA1 669 aaKnown RBP18.44■□□□□ 0.54
CXCL12-204ENST00000395793 FAM72BQ86X60 149 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 PROSER1Q86XN7 944 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 ZYG11BQ9C0D3 744 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 HSD3B7Q9H2F3 369 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 NDFIP2Q9NV92 336 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 TPX2Q9ULW0 747 aaKnown RBP18.44■□□□□ 0.54
CXCL12-204ENST00000395793 WASF2Q9Y6W5 498 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 APC2O95996 2303 aa18.44■□□□□ 0.54
CXCL12-204ENST00000395793 ANKRD11Q6UB99 2663 aaPredicted RBP18.44■□□□□ 0.54
CXCL12-204ENST00000395793 C2CD4BA6NLJ0 364 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 KPNA3O00505 521 aaPredicted RBP18.43■□□□□ 0.54
CXCL12-204ENST00000395793 CD160O95971 181 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 UNGP13051 313 aaPredicted RBP18.43■□□□□ 0.54
CXCL12-204ENST00000395793 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
CXCL12-204ENST00000395793 CLCN6P51797 869 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 BNIP3Q12983 259 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 CCDC157Q569K6 752 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 DPY19L3Q6ZPD9 716 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 APTXQ7Z2E3 356 aaKnown RBP18.43■□□□□ 0.54
CXCL12-204ENST00000395793 DRC7Q8IY82 874 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 MFSD2AQ8NA29 543 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 GRIN3AQ8TCU5 1115 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 KLK6Q92876 244 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 SKA1Q96BD8 255 aa18.43■□□□□ 0.54
CXCL12-204ENST00000395793 MYOCQ99972 504 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms