RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ADKP55263 362 aaKnown RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 ARF5P84085 180 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 ELAVL3Q14576 367 aaKnown RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 CST6Q15828 149 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 TTC31Q49AM3 519 aaPredicted RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 LYSMD4Q5XG99 296 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 SYT12Q8IV01 421 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 TC2NQ8N9U0 490 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 MRFAP1L1Q96HT8 127 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 CHP1Q99653 195 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 CATSPERBQ9H7T0 1116 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 ATP13A1Q9HD20 1204 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 ZNHIT6Q9NWK9 470 aaKnown RBP13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 IP6K2Q9UHH9 426 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 LRRK1Q38SD2 2015 aa13.66□□□□□ -0.22
HLA-DMA-202ENST00000395303 METTL12A8MUP2 240 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 PRPSAP2O60256 369 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 RNASEH1O60930 286 aaKnown RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 ADH1BP00325 375 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 C5AR1P21730 350 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 GLDCP23378 1020 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 EPHB2P29323 1055 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 ACVRL1P37023 503 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 HCAR3P49019 387 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 SERPINH1P50454 418 aaKnown RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 LIMK1P53667 647 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 YBEYP58557 167 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 SFSWAPQ12872 951 aaKnown RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 CA9Q16790 459 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 RETSATQ6NUM9 610 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 MMAAQ8IVH4 418 aaKnown RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 UMODL1-AS1Q8N2C9 162 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 PIGKQ92643 395 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 FOXJ1Q92949 421 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 KCTD15Q96SI1 283 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 CEP44Q9C0F1 390 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 NHEJ1Q9H9Q4 299 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 SGK2Q9HBY8 427 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 GPATCH2LQ9NWQ4 482 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 UVRAGQ9P2Y5 699 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 PCSK1NQ9UHG2 260 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 DNAI1Q9UI46 699 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 FZD4Q9ULV1 537 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 CFAP47Q6ZTR5 3102 aa13.65□□□□□ -0.22
HLA-DMA-202ENST00000395303 CBX4O00257 560 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 MID1O15344 667 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 SMAD6O43541 496 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 KDELR3O43731 214 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 CREB3O43889 395 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 RAMP2O60895 175 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 TMEM253P0C7T8 217 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ITPKAP23677 461 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 IL1R2P27930 398 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 SLC8A1P32418 973 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ACSL1P33121 698 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ZNF75DP51815 510 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 GEMIN4P57678 1058 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 TPI1P60174 286 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 SF3A2Q15428 464 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 CCDC6Q16204 474 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 DPYSL2Q16555 572 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 DUOXA1Q1HG43 343 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ACCSLQ4AC99 568 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 BOLA3Q53S33 107 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 IL31Q6EBC2 164 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 C22orf39Q6P5X5 142 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 SLC23A3Q6PIS1 610 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 LINGO4Q6UY18 593 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 Q6ZVU0 165 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 RABEPKQ7Z6M1 372 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 PCDH20Q8N6Y1 951 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ATP11CQ8NB49 1132 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 OR2A12Q8NGT7 310 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ZNF564Q8TBZ8 553 aaPredicted RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 TEKT4Q8WW24 435 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 ISG20Q96AZ6 181 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 HSPA12BQ96MM6 686 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 SPON2Q9BUD6 331 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 GPR174Q9BXC1 333 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 PACSIN1Q9BY11 444 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 KLC2Q9H0B6 622 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 BTBD1Q9H0C5 482 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 DEF6Q9H4E7 631 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 DHX35Q9H5Z1 703 aaKnown RBP13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
HLA-DMA-202ENST00000395303 TMEM74BQ9NUR3 256 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms