RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TBL1YQ9BQ87 522 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 TRPM5Q9NZQ8 1165 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 CHKBQ9Y259 395 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 F5P12259 2224 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GPC4O75487 556 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GJB3O75712 270 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 ANXA9O76027 345 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 GCAP28676 217 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 IRF9Q00978 393 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 PEX6Q13608 980 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 CDH18Q13634 790 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 MBTPS1Q14703 1052 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 NAA25Q14CX7 972 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 TTC1Q99614 292 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 HS3ST4Q9Y661 456 aa16.17■□□□□ 0.18
SMARCD1-202ENST00000394963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 I6L893 689 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 SMAPO00193 183 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 ADAM12O43184 909 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 RALBP11234 206 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 CPA3P15088 417 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 ATP5C1P36542 298 aaKnown RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 ZNF177Q13360 481 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 TRIM60Q495X7 471 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 TMEM109Q9BVC6 243 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 TMEM216Q9P0N5 145 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 AAR2Q9Y312 384 aaKnown RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 HACD1B0YJ81 288 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 TM4SF4P48230 202 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 SERPINB9P50453 376 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 RPS27LQ71UM5 84 aaKnown RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 RBM23Q86U06 439 aaKnown RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 FBXO22Q8NEZ5 403 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 BRD8Q9H0E9 1235 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 CERS4Q9HA82 394 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 WDR6Q9NNW5 1121 aaKnown RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 HAPLN1P10915 354 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 CDC25CP30307 473 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 SERPINB5P36952 375 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 IKBKEQ14164 716 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 LAYNQ6UX15 382 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 MAB21L3Q8N8X9 362 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 SNX31Q8N9S9 440 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 RTP3Q9BQQ7 232 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 TRIM62Q9BVG3 475 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 CINPQ9BW66 212 aaPredicted RBP16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 FAM96AQ9H5X1 160 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 SNX15Q9NRS6 342 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 PNPOQ9NVS9 261 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 KCTD3Q9Y597 815 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 PCDHGC4Q9Y5F7 938 aa16.16■□□□□ 0.18
SMARCD1-202ENST00000394963 KCNU1A8MYU2 1149 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 URODP06132 367 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 RHOCP08134 193 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 SLC11A2P49281 568 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 ZRANB3Q5FWF4 1079 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 CENPTQ96BT3 561 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 TK2O00142 265 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 KIF3CO14782 793 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 MTSS1O43312 755 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 EDF1O60869 148 aaKnown RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 XRCC4Q13426 336 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 FBXL22Q6P050 247 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 TTC8Q8TAM2 541 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 GRAMD1AQ96CP6 724 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 OXNAD1Q96HP4 312 aaPredicted RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 ZYG11BQ9C0D3 744 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 AIM2O14862 343 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 NCAM2O15394 837 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 GJB5O95377 273 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 HLA-DQB2P05538 268 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 RENBPP51606 427 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 UBAP2LQ14157 1087 aaKnown RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 RASA2Q15283 850 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 TRIM42Q8IWZ5 723 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 AGGF1Q8N302 714 aaeCLIP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 GBP7Q8N8V2 638 aaPredicted RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 HDAC10Q969S8 669 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 ATP6V1E2Q96A05 226 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 FCRL3Q96P31 734 aaPredicted RBP16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 OSER1Q9NX31 292 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 SSX2IPQ9Y2D8 614 aa16.15■□□□□ 0.18
SMARCD1-202ENST00000394963 A0A0D9SEW6 157 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 ERI2A8K979 691 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 GIPC1O14908 333 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 NBNO60934 754 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 KRT16P08779 473 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 CCR10P46092 362 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 GEMP55040 296 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 GRM3Q14832 879 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 RPS6KA2Q15349 733 aa16.14■□□□□ 0.17
SMARCD1-202ENST00000394963 FSTL4Q6MZW2 842 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms