RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 KNL1Q8NG31 2342 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 TAF4O00268 1085 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 MCF2LO15068 1137 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SRGAP2O75044 1071 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 DKK1O94907 266 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 F9P00740 461 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 IL1BP01584 269 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 RHOCP08134 193 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ZNF883P0CG24 379 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 C5AR1P21730 350 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ACVRL1P37023 503 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 PTPN9P43378 593 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 GRIA4P48058 902 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 CCR5P51681 352 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 AFF3P51826 1226 aaKnown RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 GSCP56915 257 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SNX16P57768 344 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 RPL7AP62424 266 aaKnown RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ARF5P84085 180 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SULT2A1Q06520 285 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SCAPQ12770 1279 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 IQCB1Q15051 598 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 CDO1Q16878 200 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 TTC31Q49AM3 519 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ANO6Q4KMQ2 910 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 FKBP15Q5T1M5 1219 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 PIP5KL1Q5T9C9 394 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 C19orf48Q6RUI8 117 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 PDZD3Q86UT5 571 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SPATS2Q86XZ4 545 aaKnown RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 PYROXD2Q8N2H3 581 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ARFGAP1Q8N6T3 406 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 DCAF4L2Q8NA75 395 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 OR14C36Q8NHC7 312 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 PIP4K2CQ8TBX8 421 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 GANCQ8TET4 914 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ADAMTS14Q8WXS8 1223 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SPAG5Q96R06 1193 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 AGPAT1Q99943 283 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ACE2Q9BYF1 805 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-205ENST00000394892 KLC2Q9H0B6 622 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 TNKS2Q9H2K2 1166 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 TM7SF3Q9NS93 570 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 SCML1Q9UN30 329 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
ATG4A-205ENST00000394892 ILVBLA1L0T0 632 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 PCNX2A6NKB5 2137 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 SIGLEC16A6NMB1 481 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 VILLO15195 856 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 PLRG1O43660 514 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 RNASEH1O60930 286 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 LRIG2O94898 1065 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ADH1BP00325 375 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ATXN1LP0C7T5 689 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 FTH1P19P0C7X4 201 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 OXCT1P55809 520 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 RACK1P63244 317 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 IL9RQ01113 521 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 NRG1Q02297 640 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ACCSLQ4AC99 568 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 IL27RAQ6UWB1 636 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 CCNI2Q6ZMN8 369 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 DPY19L3Q6ZPD9 716 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 SND1Q7KZF4 910 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 KANSL1Q7Z3B3 1105 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 GLRX5Q86SX6 157 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 SETD3Q86TU7 594 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 CCDC117Q8IWD4 279 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 DRC7Q8IY82 874 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 MCOLN2Q8IZK6 566 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 NETO2Q8NC67 525 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 SETD7Q8WTS6 366 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 OMDQ99983 421 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ZYG11BQ9C0D3 744 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 TTYH3Q9C0H2 523 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 MUC3BQ9H195 1237 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 OSBPL2Q9H1P3 480 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ADAM22Q9P0K1 906 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 PPARGC1AQ9UBK2 798 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 OR12D3Q9UGF7 316 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ZFR2Q9UPR6 939 aaKnown RBP9.06□□□□□ -0.96
ATG4A-205ENST00000394892 NCKAP1Q9Y2A7 1128 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 GPSM3Q9Y4H4 160 aa9.06□□□□□ -0.96
ATG4A-205ENST00000394892 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 PI4KAP42356 2102 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 FREM2Q5SZK8 3169 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 A0A1B0GTQ1 180 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CBX4O00257 560 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 SPINT1O43278 529 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CCP110O43303 1012 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 BNIP3LO60238 219 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CER1O95813 267 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 MBD3O95983 291 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 PLEKP08567 350 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 KRT3P12035 628 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 OR1E1P30953 314 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms