RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 ZNF554Q86TJ5 538 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 DEFB107AQ8IZN7 70 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 ZMIZ2Q8NF64 920 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 DGCR14Q96DF8 476 aaKnown RBP15.84■□□□□ 0.13
PTBP1-204ENST00000394601 TSPAN18Q96SJ8 248 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 TUBB6Q9BUF5 446 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 SNX25Q9H3E2 840 aa15.84■□□□□ 0.13
PTBP1-204ENST00000394601 UQCRBP14927 111 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 PGAM1P18669 254 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 RPL10P27635 214 aaKnown RBP15.83■□□□□ 0.13
PTBP1-204ENST00000394601 MFSD10Q14728 455 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 MORN1Q5T089 497 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 C6orf183Q5T699 404 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 KYAT3Q6YP21 454 aaKnown RBP15.83■□□□□ 0.13
PTBP1-204ENST00000394601 NPWQ8N729 165 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 AZIN2Q96A70 460 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 ZNF560Q96MR9 790 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 PRDM16Q9HAZ2 1276 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 DTNAQ9Y4J8 743 aa15.83■□□□□ 0.13
PTBP1-204ENST00000394601 ALOX15P16050 662 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 PTPN1P18031 435 aaKnown RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 CD68P34810 354 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 RAP1GDS1P52306 607 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 DCTN2Q13561 401 aaKnown RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 RAB41Q5JT25 222 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 ATG16L1Q676U5 607 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 CPNE9Q8IYJ1 553 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 ACMSDQ8TDX5 336 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 CAAP1Q9H8G2 361 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 MAN1C1Q9NR34 630 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 HHLA1C9JL84 531 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 PLIN3O60664 434 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 SEC24DO94855 1032 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 SRGAP2BP0DMP2 458 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 FGFR3P22607 806 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 GTF2A2P52657 109 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 SCAPQ12770 1279 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 MYLK3Q32MK0 819 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 ANKDD1AQ495B1 522 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 SV2CQ496J9 727 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 PPM1JQ5JR12 505 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 VWA5B1Q5TIE3 1220 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 WSCD1Q658N2 575 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 PLEKHH3Q7Z736 793 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 CTU1Q7Z7A3 348 aaKnown RBP15.83■□□□□ 0.12
PTBP1-204ENST00000394601 TMIGD2Q96BF3 282 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 ZFP42Q96MM3 310 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 HAPLN3Q96S86 360 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 CLEC11AQ9Y240 323 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 TSC22D4Q9Y3Q8 395 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 NUP205Q92621 2012 aa15.83■□□□□ 0.12
PTBP1-204ENST00000394601 SHROOM3Q8TF72 1996 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 MYLKQ15746 1914 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 LSM1O15116 133 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 PABPC4LP0CB38 370 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 CPOXP36551 454 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 RGS2P41220 211 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 PRAMEP78395 509 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 TRMT5Q32P41 509 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 FASTKD1Q53R41 847 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 ACAD11Q709F0 780 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 RAVER1Q8IY67 606 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 GIPC3Q8TF64 312 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 BRD8Q9H0E9 1235 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 THAP1Q9NVV9 213 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 SELENONQ9NZV5 590 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 SH3GLB1Q9Y371 365 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 PTPRDP23468 1912 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 ZCWPW2A0A1B0GU75 182 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 YJEFN3A6XGL0 299 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 PTPN3P26045 913 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 ARL4AP40617 200 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 SESN2P58004 480 aaPredicted RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 ACTR3P61158 418 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 MRPS22P82650 360 aaKnown RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 MSLNQ13421 630 aaPredicted RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 N4BP2L1Q5TBK1 243 aaPredicted RBP15.82■□□□□ 0.12
PTBP1-204ENST00000394601 WNT8BQ93098 351 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 SMOQ99835 787 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 PATJQ8NI35 1801 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 NLRC5Q86WI3 1866 aa15.82■□□□□ 0.12
PTBP1-204ENST00000394601 C9IYK1 514 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 M0QYT0 321 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 F7P08709 466 aaPredicted RBP15.81■□□□□ 0.12
PTBP1-204ENST00000394601 SERPINB8P50452 374 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 GJA9P57773 515 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 TLR1Q15399 786 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 CES3Q6UWW8 571 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 RNF111Q6ZNA4 994 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 NANOGNBQ7Z5D8 188 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 TNIP3Q96KP6 325 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 SEMA6AQ9H2E6 1030 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 S100A14Q9HCY8 104 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 NEU3Q9UQ49 428 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 AIM2O14862 343 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 ERVK-10P10266 1014 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 ADRA1BP35368 520 aa15.81■□□□□ 0.12
PTBP1-204ENST00000394601 RXRGP48443 463 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms