RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 NAT16Q8N8M0 369 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 FNIP1Q8TF40 1166 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 OTUB2Q96DC9 234 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 NAF1Q96HR8 494 aaKnown RBP11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 HES6Q96HZ4 224 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 PBKQ96KB5 322 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 ACOX2Q99424 681 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 PCED1AQ9H1Q7 454 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 GOLPH3Q9H4A6 298 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 L2HGDHQ9H9P8 463 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 CSNK1G1Q9HCP0 422 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 DMAP1Q9NPF5 467 aaPredicted RBP11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 ITM2CQ9NQX7 267 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 METTL5Q9NRN9 209 aaKnown RBP11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 TRPM5Q9NZQ8 1165 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 CFAP97Q9P2B7 532 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 ANKRD6Q9Y2G4 727 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 RAD54BQ9Y620 910 aa11.41□□□□□ -0.58
VTI1BP2-201ENST00000394154 GFRA2O00451 464 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 CES2O00748 559 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 KCNK3O14649 394 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 TRIM66O15016 1216 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SART1O43290 800 aaKnown RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 DFNA5O60443 496 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 BEST1O76090 585 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 GJB6O95452 261 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 LDOC1O95751 146 aaPredicted RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 OLFM2O95897 454 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 PSMA2P25787 234 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 RFC1P35251 1148 aaPredicted RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 GRIK1P39086 918 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 MAGEA11P43364 429 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 GRIA4P48058 902 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 ACADVLP49748 655 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 DNA2P51530 1060 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 RNASE9P60153 205 aaKnown RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 ADIGQ0VDE8 80 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 NFATC3Q12968 1075 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 CFAP221Q4G0U5 840 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 GRAMD4Q6IC98 578 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 OLFML1Q6UWY5 402 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 ATG14Q6ZNE5 492 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SLC26A9Q7LBE3 791 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SCN4BQ8IWT1 228 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 MNS1Q8NEH6 495 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 CNDP2Q96KP4 475 aaKnown RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 ZNF578Q96N58 590 aaPredicted RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 KCNK16Q96T55 309 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 NCAPGQ9BPX3 1015 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 TRIM7Q9C029 511 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 RNF38Q9H0F5 515 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 PNPLA8Q9NP80 782 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 ASNSD1Q9NWL6 643 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SMPD4Q9NXE4 827 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 RNF14Q9UBS8 474 aa11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 PACSIN2Q9UNF0 486 aaPredicted RBP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.4□□□□□ -0.58
VTI1BP2-201ENST00000394154 SPTAN1Q13813 2472 aaKnown RBP11.4□□□□□ -0.59
VTI1BP2-201ENST00000394154 CCDC66A2RUB6 948 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 H0Y8X5 98 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 RNF8O76064 485 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 GLI1P08151 1106 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 KRT10P13645 584 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 PDGFRAP16234 1089 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 GPD1P21695 349 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CTNNA2P26232 953 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 PAFAH1B1P43034 410 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 SSR1P43307 286 aaKnown RBP11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 PPP3CCP48454 512 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 TPMTP51580 245 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 TKTL1P51854 596 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 SERINC3Q13530 473 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 STARD3Q14849 445 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 RAB41Q5JT25 222 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 C6orf132Q5T0Z8 1188 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CCDC181Q5TID7 509 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 ARCQ7LC44 396 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 ZMIZ2Q8NF64 920 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 JOSD2Q8TAC2 188 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 SNX19Q92543 992 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 HIC2Q96JB3 615 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 C8orf48Q96LL4 319 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CNPY3Q9BT09 278 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 CNGB3Q9NQW8 809 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 EHD2Q9NZN4 543 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 TMEM59LQ9UK28 342 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
VTI1BP2-201ENST00000394154 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
VTI1BP2-201ENST00000394154 ZNF840PA6NDX5 716 aa11.38□□□□□ -0.59
VTI1BP2-201ENST00000394154 C2CD4BA6NLJ0 364 aa11.38□□□□□ -0.59
VTI1BP2-201ENST00000394154 HHLA1C9JL84 531 aa11.38□□□□□ -0.59
VTI1BP2-201ENST00000394154 F8VP50 259 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms