RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PCDH20Q8N6Y1 951 aaKnown RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 NEU2Q9Y3R4 380 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 TNRC6BQ9UPQ9 1833 aaKnown RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 TSPAN11A1L157 253 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 PECAM1P16284 738 aaPredicted RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 CR2P20023 1033 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 RENBPP51606 427 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 ARMC3Q5W041 872 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 CCDC13Q8IYE1 715 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 P3H4Q92791 437 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 PPP1R2P1Q96PQ5 205 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 MGME1Q9BQP7 344 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 USP29Q9HBJ7 922 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 C5orf60A6NFR6 353 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 KRT10P13645 584 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 ACVRL1P37023 503 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SOX9P48436 509 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 FNTAP49354 379 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 PON2Q15165 354 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 CDKL3Q8IVW4 592 aaPredicted RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 LHX3Q9UBR4 397 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 C5orf42Q9H799 3197 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 IGLV3-19P01714 112 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SRCP12931 536 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 GRM3Q14832 879 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 CYTH1Q15438 398 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 AADACL2Q6P093 401 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TUBGCP5Q96RT8 1024 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TBC1D17Q9HA65 648 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 ATP13A1Q9HD20 1204 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 PRMT8Q9NR22 394 aaPredicted RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 PCYOX1Q9UHG3 505 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TRHDEQ9UKU6 1024 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 EML5Q05BV3 1969 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 SCN8AQ9UQD0 1980 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 COL6A3P12111 3177 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 CCDC188H7C350 402 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 ENC1O14682 589 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 ATG13O75143 517 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 GCATO75600 419 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 AOC1P19801 751 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 STIP1P31948 543 aaKnown RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 TFB1MQ8WVM0 346 aaKnown RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 NELL1Q92832 810 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 HAUS2Q9NVX0 235 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 IPO11Q9UI26 975 aaKnown RBP13.53□□□□□ -0.24
USP44-202ENST00000393091 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
USP44-202ENST00000393091 FANCMQ8IYD8 2048 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.24
USP44-202ENST00000393091 TNFRSF10AO00220 468 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 TDGF1P13385 188 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 HNRNPA1L2Q32P51 320 aaKnown RBP13.52□□□□□ -0.24
USP44-202ENST00000393091 CCDC50Q8IVM0 306 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 ATPAF2Q8N5M1 289 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 PRELID2Q8N945 189 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 HAUS1Q96CS2 278 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 MUC3BQ9H195 1237 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 PLK2Q9NYY3 685 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 VPS28Q9UK41 221 aa13.52□□□□□ -0.24
USP44-202ENST00000393091 EDDM13A0A1B0GTR0 161 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 M0R296 226 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 SCAMP3O14828 347 aaKnown RBP13.52□□□□□ -0.25
USP44-202ENST00000393091 MAPK8P45983 427 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
USP44-202ENST00000393091 SIX5Q8N196 739 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 IL17RCQ8NAC3 791 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 TMIEQ8NEW7 156 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 ACTL9Q8TC94 416 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 CDC23Q9UJX2 597 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 MRFAP1Q9Y605 127 aa13.52□□□□□ -0.25
USP44-202ENST00000393091 PLXNA2O75051 1894 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 TCRBV7S2A1N4TA0A589 114 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 MAGEA6P43360 314 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 ZNF211Q13398 564 aaPredicted RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 ZNF234Q14588 700 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 P3H1Q32P28 736 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 SYT10Q6XYQ8 523 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 SYDE1Q6ZW31 735 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms