RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 HOXD8P13378 290 aaPredicted RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC2A4P14672 509 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RPA1P27694 616 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 GPC3P51654 580 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 STX1BP61266 288 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RHOT2Q8IXI1 618 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SP8Q8IXZ3 490 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 BBS5Q8N3I7 341 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ATAD1Q8NBU5 361 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC7A6OSQ96CW6 309 aaPredicted RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 RPL10LQ96L21 214 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 SMOQ99835 787 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 KLF16Q9BXK1 252 aaPredicted RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 PKD2L1Q9P0L9 805 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ANKFY1Q9P2R3 1169 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 FAM96BQ9Y3D0 163 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RAD54L2Q9Y4B4 1467 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ZC3H12DA2A288 527 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 MEI4A8MW99 385 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CETN3O15182 167 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TEX33O43247 280 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NDUFS3O75489 264 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ITGA10O75578 1167 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 BMP3P12645 472 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ICAM3P32942 547 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 BSGP35613 385 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 KIR3DL1P43629 444 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ST8SIA6P61647 398 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 HTD2P86397 168 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 BNIP3Q12983 259 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 SLC5A9Q2M3M2 681 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 COL28A1Q2UY09 1125 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 KBTBD12Q3ZCT8 623 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NAA35Q5VZE5 725 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 MEX3BQ6ZN04 569 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 SFRP1Q8N474 314 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CCDC63Q8NA47 563 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CEP76Q8TAP6 659 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CREB3L4Q8TEY5 395 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 XAGE5Q8WWM1 108 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 PIBF1Q8WXW3 757 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 EZH1Q92800 747 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 KIAA1143Q96AT1 154 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 FAM149B1Q96BN6 582 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 MSLNLQ96KJ4 702 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 Q96M66 194 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ING3Q9NXR8 418 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ADGRE2Q9UHX3 823 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GPR160Q9UJ42 338 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 COG5Q9UP83 839 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 EXOC6BQ9Y2D4 811 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 LAMA2P24043 3122 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 LMTK3Q96Q04 1460 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 FAM229AH3BQW9 127 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 POTEB2H3BUK9 544 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TFRCP02786 760 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 CNPP09543 421 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 CYP4B1P13584 511 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CSF2RAP15509 400 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ITGALP20701 1170 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 PAICSP22234 425 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 TCEA1P23193 301 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 TCF7P36402 384 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 CETN2P41208 172 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ZNF75DP51815 510 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TRA2BP62995 288 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 HTRA4P83105 476 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 SPAG1Q07617 926 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ACSM2AQ08AH3 577 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NFATC3Q12968 1075 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ALCAMQ13740 583 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 IRF3Q14653 427 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 HSP90AA4PQ58FG1 418 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ACSM2BQ68CK6 577 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 USP17L6PQ6QN14 398 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CENPVQ7Z7K6 275 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 ZDHHC14Q8IZN3 488 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 IFI44Q8TCB0 444 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GLG1Q92896 1179 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 RNFT2Q96EX2 444 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ATP6V1G3Q96LB4 118 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 DDX50Q9BQ39 737 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 FUZQ9BT04 418 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TP63Q9H3D4 680 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 GLOD4Q9HC38 313 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 BPIFA1Q9NP55 256 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 LZTFL1Q9NQ48 299 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.64□□□□□ -1.83
XRN1-202ENST00000392981 HSPBP1Q9NZL4 362 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 RAD54BQ9Y620 910 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 DYNC1I1O14576 645 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 WNT9AO14904 365 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TMEM63AO94886 807 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 EBLN1P0CF75 366 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ERVFC1P60507 584 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NFIAQ12857 509 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CEBPEQ15744 281 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GPR162Q16538 588 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 SLC39A12Q504Y0 691 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms