RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PAFAH1B3Q15102 231 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 DLG2Q15700 870 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 USP39Q53GS9 565 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ANKRD20A8PQ5CZ79 823 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 AFMIDQ63HM1 303 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZC3H14Q6PJT7 736 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ADGRD1Q6QNK2 874 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 BZW1Q7L1Q6 419 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 PEX26Q7Z412 305 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 LONP2Q86WA8 852 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 KATNAL2Q8IYT4 538 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SH2D3CQ8N5H7 860 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 UBL4BQ8N7F7 174 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 LRRC57Q8N9N7 239 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ATP11CQ8NB49 1132 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZBTB44Q8NCP5 570 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 TRIM58Q8NG06 486 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 OR7D4Q8NG98 312 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 OR2T3Q8NH03 318 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 EXD1Q8NHP7 514 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SORCS1Q8WY21 1168 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RAPGEF5Q92565 580 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RBM41Q96IZ5 413 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RPL10LQ96L21 214 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RNF157Q96PX1 679 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 PSMB7Q99436 277 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 KLC2Q9H0B6 622 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SEMA4AQ9H3S1 761 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 CD248Q9HCU0 757 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZSCAN32Q9NX65 697 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 VPS51Q9UID3 782 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SLCO3A1Q9UIG8 710 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 GUCA1BQ9UMX6 200 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SCML1Q9UN30 329 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 EFR3BQ9Y2G0 817 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 PPP2R2CQ9Y2T4 447 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RAD54BQ9Y620 910 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 WDR87Q6ZQQ6 2873 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 MUC6Q6W4X9 2439 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ATG2BQ96BY7 2078 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 TCRBV21S2A2A0A5A6 115 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ANTXRLA6NF34 631 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 C3orf70A6NLC5 250 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TTC34A8MYJ7 566 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ESPNB1AK53 854 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 H0Y858 1186 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 MCF2LO15068 1137 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 AXIN1O15169 862 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ALOX15BO15296 676 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SNAP91O60641 907 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PRAMEF11O60813 436 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF217O75362 1048 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PALMO75781 387 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 KRT1P04264 644 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 CD48P09326 243 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SRCP12931 536 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 MX2P20592 715 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PRKCHP24723 683 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 GJC1P36383 396 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ACVRL1P37023 503 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 WASP42768 502 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 CTSOP43234 321 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 RECQLP46063 649 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 NR2C2P49116 596 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SERPINH1P50454 418 aaKnown RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PEX5P50542 639 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PAPOLAP51003 745 aaKnown RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 RWDD2BP57060 319 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ARF5P84085 180 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF33AQ06730 810 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 IL10RBQ08334 325 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 CCDC15Q0P6D6 951 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TCF15Q12870 199 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ELAVL3Q14576 367 aaKnown RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PPP2R5EQ16537 467 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TAZQ16635 292 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ACCSLQ4AC99 568 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TFDP3Q5H9I0 405 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 C9orf64Q5T6V5 341 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SLC9A4Q6AI14 798 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 DSG4Q86SJ6 1040 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 NT5DC3Q86UY8 548 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 C11orf74Q86VG3 221 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF354CQ86Y25 554 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 CPNE8Q86YQ8 564 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ARHGAP12Q8IWW6 846 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PCDH20Q8N6Y1 951 aaKnown RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PCDH19Q8TAB3 1148 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 FRS2Q8WU20 508 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 NSMCE1Q8WV22 266 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 OR8D1Q8WZ84 308 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PRCCQ92733 491 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PTPRN2Q92932 1015 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms