RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 AKAP5P24588 427 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 THOP1P52888 689 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 IL5RAQ01344 420 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC18A2Q05940 514 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 UBR7Q8N806 425 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 CATSPERBQ9H7T0 1116 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 EXOSC4Q9NPD3 245 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 STX16-NPEPL1H3BU86 382 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 EDIL3O43854 480 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 YBX3P16989 372 aaKnown RBP eCLIP13.33□□□□□ -0.275e-6■■■□□ 19.1
TRAPPC9-201ENST00000389328 LSM3P62310 102 aaKnown RBP13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 PLCL1Q15111 1095 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 PCDH19Q8TAB3 1148 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 NRG4Q8WWG1 115 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 FIG4Q92562 907 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 TCF12Q99081 682 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 ALG9Q9H6U8 611 aa13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC9-201ENST00000389328 C4AP0C0L4 1744 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 WNT10BO00744 389 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CABYRO75952 493 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC166P0CW27 439 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCNG1P51959 295 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 BNIPLQ7Z465 357 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 MFSD3Q96ES6 412 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 COQ10BQ9H8M1 238 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CRYL1Q9Y2S2 319 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 TSPAN3O60637 253 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CHRNGP07510 517 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CBX3Q13185 183 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 METTL21CQ5VZV1 264 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 NOTUMQ6P988 496 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC22A9Q8IVM8 553 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 PPP1R10Q96QC0 940 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 IL22Q9GZX6 179 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 ATAD3AQ9NVI7 634 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 TEX264Q9Y6I9 313 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 DHRS12A0PJE2 317 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 NCAM2O15394 837 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CBFA2T3O75081 653 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CDH13P55290 713 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 DGCR6Q14129 220 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 CA9Q16790 459 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 NEPROQ6NW34 567 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 OSCP1Q8WVF1 389 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 SNX19Q92543 992 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 NTPCRQ9BSD7 190 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 SYT11Q9BT88 431 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 MRIQ9BWK5 157 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCDHAC1Q9H158 963 aa13.33□□□□□ -0.28
TRAPPC9-201ENST00000389328 ASB14A6NK59 587 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 JAG1P78504 1218 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 INSCQ1MX18 579 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 ABRAXAS1Q6UWZ7 409 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PIWIL4Q7Z3Z4 852 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 OR52B2Q96RD2 323 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 NOL6Q9H6R4 1146 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 NT5MQ9NPB1 228 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CASS4Q9NQ75 786 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCDHGC3Q9UN70 934 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 C9JVG2 144 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 KLF11O14901 512 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 MT-ND1P03886 318 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCNAP12004 261 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CDH2P19022 906 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 TPSB2P20231 275 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 ATP5F1P24539 256 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC5A3P53794 718 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC85BQ15834 202 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 ABHD15Q6UXT9 468 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 HSPBAP1Q96EW2 488 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 FAM8A1Q9UBU6 413 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 HES2Q9Y543 173 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF541Q9H0D2 1346 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 SOAT2O75908 522 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms