RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 A0A0G2JPF8 293 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 PRSS29PA6NIE9 313 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 HNRNPCL3B7ZW38 293 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 RASA4BC9J798 803 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 HNRNPCL1O60812 293 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 CAVIN2O95810 425 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 ENO1P06733 434 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 FAM153BP0C7A2 387 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 HNRNPCL4P0DMR1 293 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 FDPSP14324 419 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 MCM5P33992 734 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 MAP2K2P36507 400 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 THPOP40225 353 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 LIFRP42702 1097 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 MTHFRP42898 656 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 MTHFSP49914 203 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 PRKAG1P54619 331 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 SSRP1Q08945 709 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 BMS1Q14692 1282 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 ANXA2RQ3ZCQ2 193 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 SETMARQ53H47 684 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 CCNYL2Q5T2Q4 361 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 CDCA2Q69YH5 1023 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 TYW3Q6IPR3 259 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 ADCK1Q86TW2 530 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 PRR22Q8IZ63 422 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 C11orf42Q8N5U0 333 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 TPRX1Q8N7U7 411 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 STPG4Q8N801 248 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 BICD2Q8TD16 824 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 TM9SF4Q92544 642 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 WDYHV1Q96HA8 205 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 C2orf48Q96LS8 159 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 MOGAT1Q96PD6 335 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 CINPQ9BW66 212 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 SMARCAL1Q9NZC9 954 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 ZKSCAN7Q9P0L1 754 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 INPP5FQ9Y2H2 1132 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 SRPRBQ9Y5M8 271 aaKnown RBP-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 OTOGQ6ZRI0 2925 aa-0.47□□□□□ -2.48
RNU6-540P-201ENST00000384622 FAM208BQ5VWN6 2430 aa-0.47□□□□□ -2.49
RNU6-540P-201ENST00000384622 ABCA12Q86UK0 2595 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 TDRD15B5MCY1 1934 aaKnown RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 IGF2RP11717 2491 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 A0A0G2JLW4 131 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 WI2-2373I1.2A0A1W2PRP0 233 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ASPDHA6ND91 283 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PRR32B1ATL7 298 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ASLP04424 464 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 JMJD7P0C870 316 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ERVK-10P10266 1014 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 MTHFD2P13995 350 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ENPP1P22413 925 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF133P52736 654 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 RIPK4P57078 832 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PITX1P78337 314 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 CDC42EP1Q00587 391 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 TLE1Q04724 770 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PMPCAQ10713 525 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 FUT7Q11130 342 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 KIF22Q14807 665 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 NFE2L2Q16236 605 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 AMOTQ4VCS5 1084 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ALG10Q5BKT4 473 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ALG10BQ5I7T1 473 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 KPRPQ5T749 579 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 SERTAD4-AS1Q5TG53 156 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 GRHL2Q6ISB3 625 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 DDX42Q86XP3 938 aaKnown RBP eCLIP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF280BQ86YH2 543 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ENTHD1Q8IYW4 607 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 NXPE1Q8N323 547 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 TEX45Q8NA69 505 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 KDM1BQ8NB78 822 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZFPM2Q8WW38 1151 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PHYHIPLQ96FC7 376 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 SERAC1Q96JX3 654 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ZNF354BQ96LW1 612 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 TSG101Q99816 390 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 MRPL4Q9BYD3 311 aaKnown RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 B3GNT4Q9C0J1 378 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 KCNN2Q9H2S1 579 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 GBA2Q9HCG7 927 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ERVK-5Q9HDB9 667 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 C2orf42Q9NWW7 574 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PFDN2Q9UHV9 154 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 PCDHGA2Q9Y5H1 932 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 SPATA31A5Q5VU36 1347 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 SPATA31A7Q8IWB4 1347 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 TNCP24821 2201 aa-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ANKRD11Q6UB99 2663 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-540P-201ENST00000384622 ATRQ13535 2644 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 TGP01266 2768 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 A0A087WWL8 130 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 DYTNA2CJ06 578 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 TTC34A8MYJ7 566 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 SRRM5B3KS81 715 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 PHGDHO43175 533 aaKnown RBP-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 F2P00734 622 aa-0.49□□□□□ -2.49
RNU6-540P-201ENST00000384622 C9P02748 559 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms