RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TGDSO95455 350 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 ITGA2BP08514 1039 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 GEMP55040 296 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 CCL23P55773 120 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 USP41Q3LFD5 358 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 CERCAMQ5T4B2 595 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 CNKSR3Q6P9H4 555 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 PRSS55Q6UWB4 352 aaPredicted RBP19.59■□□□□ 0.73
GMDS-201ENST00000380805 TRIM42Q8IWZ5 723 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 C10orf82Q8WW14 230 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 RMDN2Q96LZ7 410 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 TBX21Q9UL17 535 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 HBS1LQ9Y450 684 aaKnown RBP19.59■□□□□ 0.73
GMDS-201ENST00000380805 TBX18O95935 607 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 HLA-DQB2P05538 268 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 C5orf22Q49AR2 442 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 C10orf120Q5SQS8 335 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 DENND5AQ6IQ26 1287 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 KYAT3Q6YP21 454 aaKnown RBP19.59■□□□□ 0.73
GMDS-201ENST00000380805 NDUFAF2Q8N183 169 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 USP33Q8TEY7 942 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 PTCD2Q8WV60 388 aaKnown RBP19.59■□□□□ 0.73
GMDS-201ENST00000380805 VWCEQ96DN2 955 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 RBBP8Q99708 897 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 TBL1YQ9BQ87 522 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 VN1R3Q9BXE9 311 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 RETREG1Q9H6L5 497 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 MRM3Q9HC36 420 aaKnown RBP19.59■□□□□ 0.73
GMDS-201ENST00000380805 PCMTD2Q9NV79 361 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 SLC17A6Q9P2U8 582 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 CAPN7Q9Y6W3 813 aa19.59■□□□□ 0.73
GMDS-201ENST00000380805 BIRC5O15392 142 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 ERVK-10P10266 1014 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 ALDH7A1P49419 539 aaKnown RBP19.58■□□□□ 0.72
GMDS-201ENST00000380805 LIMK2P53671 638 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 SF3A3Q12874 501 aaKnown RBP eCLIP19.58■□□□□ 0.72
GMDS-201ENST00000380805 SPDYAQ5MJ70 313 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 TEDDM1Q5T9Z0 273 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 FBXL22Q6P050 247 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.58■□□□□ 0.72
GMDS-201ENST00000380805 MICALL1Q8N3F8 863 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 TEX26Q8N6G2 289 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 FITM2Q8N6M3 262 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 SPATA22Q8NHS9 363 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 IGSF21Q96ID5 467 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 ENTPD7Q9NQZ7 604 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 RBM22Q9NW64 420 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■□□□□ 9.5
GMDS-201ENST00000380805 PCDH10Q9P2E7 1040 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 MIA3Q5JRA6 1907 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 ALPK3Q96L96 1907 aa19.58■□□□□ 0.72
GMDS-201ENST00000380805 ADAM12O43184 909 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 TLR5O60602 858 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 GLRA3O75311 464 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 UBOX5O94941 541 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 TUFMP49411 452 aaKnown RBP19.57■□□□□ 0.72
GMDS-201ENST00000380805 CSE1LP55060 971 aaKnown RBP19.57■□□□□ 0.72
GMDS-201ENST00000380805 BNIP1Q12981 228 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 MPP3Q13368 585 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 INSCQ1MX18 579 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 ALFQ53S48 1182 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 FYB2Q5VWT5 728 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 KLHDC10Q6PID8 442 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 CES3Q6UWW8 571 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 PDZD8Q8NEN9 1154 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 MFSD3Q96ES6 412 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 PPP1R12CQ9BZL4 782 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 UBP1Q9NZI7 540 aa19.57■□□□□ 0.72
GMDS-201ENST00000380805 SLC12A8A0AV02 714 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 WDR91A4D1P6 747 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 C2CD2LO14523 706 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 CNTN5O94779 1100 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 MT-CYBP00156 380 aaPredicted RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 RFC2P35250 354 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 MAPKAPK2P49137 400 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 RENBPP51606 427 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 IKBKEQ14164 716 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 PCID2Q5JVF3 399 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 POTEHQ6S545 545 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 RANBP10Q6VN20 620 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 MIB1Q86YT6 1006 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 IGSF8Q969P0 613 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 APOL2Q9BQE5 337 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 TSSK1BQ9BXA7 367 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 SLC25A51Q9H1U9 297 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 CCSER2Q9H7U1 834 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 ARNT2Q9HBZ2 717 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 CHRAC1Q9NRG0 131 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 TXNDC16Q9P2K2 825 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 AFF4Q9UHB7 1163 aaKnown RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 TPP1O14773 563 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 ATP9BO43861 1147 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 TROVE2P10155 538 aaKnown RBP eCLIP19.56■□□□□ 0.722e-8■□□□□ 9.1
GMDS-201ENST00000380805 SPRP35270 261 aaPredicted RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 SKIV2L2P42285 1042 aaKnown RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 YBEYP58557 167 aaPredicted RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 PDE1CQ14123 709 aaPredicted RBP19.56■□□□□ 0.72
GMDS-201ENST00000380805 PARP15Q460N3 678 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 RAP1GAP2Q684P5 730 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 PDPK2PQ6A1A2 396 aa19.56■□□□□ 0.72
GMDS-201ENST00000380805 PKN3Q6P5Z2 889 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms