RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 OXR1Q8N573 874 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 C18orf8Q96DM3 657 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 CLSTN2Q9H4D0 955 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 MPP6Q9NZW5 540 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 DMTF1Q9Y222 760 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 MYLKQ15746 1914 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 IGSF10Q6WRI0 2623 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 A0A0D9SEW6 157 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 DRGXA6NNA5 263 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 K7ERQ8 282 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 SMAD6O43541 496 aaKnown RBP17.27■□□□□ 0.36
SMN2-201ENST00000380741 RFPL3O75679 317 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 F9P00740 461 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 RRM1P23921 792 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 FLT3P36888 993 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 SCNN1AP37088 669 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 ACADVLP49748 655 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 CLDN6P56747 220 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 STAT4Q14765 748 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 SETMARQ53H47 684 aaPredicted RBP17.27■□□□□ 0.36
SMN2-201ENST00000380741 C2CD6Q53TS8 623 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 LINGO4Q6UY18 593 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 KANSL1Q7Z3B3 1105 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 TFAP2DQ7Z6R9 452 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 SETD3Q86TU7 594 aaPredicted RBP17.27■□□□□ 0.36
SMN2-201ENST00000380741 IQCHQ86VS3 1027 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 TMPRSS12Q86WS5 348 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 ERICH1Q86X53 443 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 PDCD7Q8N8D1 485 aaKnown RBP17.27■□□□□ 0.36
SMN2-201ENST00000380741 DCAF4L2Q8NA75 395 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 OR2A12Q8NGT7 310 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 C1orf74Q96LT6 269 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 NAA15Q9BXJ9 866 aaKnown RBP17.27■□□□□ 0.36
SMN2-201ENST00000380741 PREBQ9HCU5 417 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.36
SMN2-201ENST00000380741 IGLV3-10A0A075B6K4 115 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 PRAMEF26H0Y7S4 382 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 RNF103O00237 685 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 KPNA3O00505 521 aaPredicted RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 MAGEC1O60732 1142 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 RNGTTO60942 597 aaKnown RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 GLDCP23378 1020 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 ERCC5P28715 1186 aaPredicted RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 CHRNA3P32297 505 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 OVGP1Q12889 678 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 ARTNQ5T4W7 220 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 C6orf118Q5T5N4 469 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 TRNP1Q6NT89 227 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 NOP9Q86U38 636 aaKnown RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 TSC1Q92574 1164 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 ARRDC3Q96B67 414 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 CCDC114Q96M63 670 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 MYOCQ99972 504 aa17.26■□□□□ 0.35
SMN2-201ENST00000380741 FARP1Q9Y4F1 1045 aaPredicted RBP17.26■□□□□ 0.35
SMN2-201ENST00000380741 TDRD6O60522 2096 aaKnown RBP17.25■□□□□ 0.35
SMN2-201ENST00000380741 A0A1W2PQU0 124 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 E9PAM4 449 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 GOLGA8SH3BPF8 625 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 SRGAP2O75044 1071 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 SDC3O75056 442 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 LSM8O95777 96 aaKnown RBP17.25■□□□□ 0.35
SMN2-201ENST00000380741 C1SP09871 688 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 UCHL3P15374 230 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 PRLRP16471 622 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 CLCN6P51797 869 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 COL9A2Q14055 689 aaPredicted RBP17.25■□□□□ 0.35
SMN2-201ENST00000380741 C22orf39Q6P5X5 142 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 BNIPLQ7Z465 357 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 PDZD3Q86UT5 571 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 TMEM145Q8NBT3 493 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 CHST14Q8NCH0 376 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 TMIEQ8NEW7 156 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 OR7D4Q8NG98 312 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 KLK6Q92876 244 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 TNKS2Q9H2K2 1166 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 SAMSN1Q9NSI8 373 aaKnown RBP17.25■□□□□ 0.35
SMN2-201ENST00000380741 ZNF212Q9UDV6 495 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 DACH1Q9UI36 760 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 TRPM6Q9BX84 2022 aa17.25■□□□□ 0.35
SMN2-201ENST00000380741 F8VZ95 297 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 SLC31A1O15431 190 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 PRNPP04156 253 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 CDK4P11802 303 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 JUPP14923 745 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 OR1E1P30953 314 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 HNF1BP35680 557 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 NOMO3P69849 1222 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 ACBD5Q5T8D3 534 aaPredicted RBP17.24■□□□□ 0.35
SMN2-201ENST00000380741 HORMAD1Q86X24 394 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 FAM131BQ86XD5 332 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 GRIN3AQ8TCU5 1115 aa17.24■□□□□ 0.35
SMN2-201ENST00000380741 CPA5Q8WXQ8 436 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms