RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 RGSL1A5PLK6 1076 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 HDAC3O15379 428 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 JCHAINP01591 159 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 SAT1P21673 171 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 DNAJB2P25686 324 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 NMBRP28336 390 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 NUMBP49757 651 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 USP10Q14694 798 aaKnown RBP16.61■□□□□ 0.25
VPS16-203ENST00000380469 GRM3Q14832 879 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 KIAA0319Q5VV43 1072 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 TWF2Q6IBS0 349 aaKnown RBP16.61■□□□□ 0.25
VPS16-203ENST00000380469 C16orf89Q6UX73 402 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GPR22Q99680 433 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 APBA2Q99767 749 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 PIDD1Q9HB75 910 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 UBP1Q9NZI7 540 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 OR12D3Q9UGF7 316 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 TSC2P49815 1807 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GOLGA8QA0A0J9YX86 632 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GOLGA8OA6NCC3 632 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GOLGA8NF8WBI6 632 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GOLGA8TH3BQL2 631 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 I6L893 689 aaPredicted RBP16.61■□□□□ 0.25
VPS16-203ENST00000380469 MATN2O00339 956 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 AIM2O14862 343 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 UQCRBP14927 111 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 MPSTP25325 297 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GRIA4P48058 902 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 LHX1P48742 406 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 COG7P83436 770 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 GRB14Q14449 540 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 PPP2R5DQ14738 602 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 TRIP10Q15642 601 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 SFT2D3Q587I9 215 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 FOXB2Q5VYV0 432 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 KBTBD6Q86V97 674 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 ARHGAP18Q8N392 663 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 ACVR1CQ8NER5 493 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 SENP8Q96LD8 212 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 SMOQ99835 787 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 SH3GL3Q99963 347 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 MCMBPQ9BTE3 642 aa16.61■□□□□ 0.25
VPS16-203ENST00000380469 RUVBL2Q9Y230 463 aaKnown RBP16.61■□□□□ 0.25
VPS16-203ENST00000380469 NEMP1O14524 444 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 CABYRO75952 493 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 AMHP03971 560 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 CHRNGP07510 517 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 PIK3R1P27986 724 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 CRYBB1P53674 252 aaPredicted RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 USP50Q70EL3 339 aaPredicted RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 FAM35AQ86V20 835 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 LCA5Q86VQ0 697 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 ST13P4Q8IZP2 240 aaPredicted RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 CNDP1Q96KN2 507 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 TKTL2Q9H0I9 626 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 RHOJQ9H4E5 214 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 WDR55Q9H6Y2 383 aaPredicted RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 VTI1BQ9UEU0 232 aa16.6■□□□□ 0.25
VPS16-203ENST00000380469 PRPF19Q9UMS4 504 aaKnown RBP16.6■□□□□ 0.25
VPS16-203ENST00000380469 EME2A4GXA9 379 aaPredicted RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 SLCO1B7G3V0H7 640 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 DDHD2O94830 711 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SBF1O95248 1867 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PEX2P28328 305 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 NUDT2P50583 147 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 POLE2P56282 527 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PRKAA1Q13131 559 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SLC12A1Q13621 1099 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SETD3Q86TU7 594 aaPredicted RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 ZC3HC1Q86WB0 502 aaKnown RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 GALNT15Q8N3T1 639 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 KYQ8NBH2 561 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 RP9Q8TA86 221 aaKnown RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 KIFC1Q9BW19 673 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SNX10Q9Y5X0 201 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 BTBD19C9JJ37 291 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 TK2O00142 265 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PTGESO14684 152 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SLC22A2O15244 555 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 TREHO43280 583 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PEX1O43933 1283 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PIGNO95427 931 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 TFEBP19484 476 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 UGP2Q16851 508 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 LSM12Q3MHD2 195 aaKnown RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 ARL13AQ5H913 290 aaPredicted RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 RAB41Q5JT25 222 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 GPRIN1Q7Z2K8 1008 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 SDCCAG8Q86SQ7 713 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms