RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SNX10Q9Y5X0 201 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 FAM170AA1A519 330 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 K7ERQ8 282 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 ADCY5O95622 1261 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 MT-CO1P00395 513 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 CTSLP07711 333 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 RRM1P23921 792 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 NOS2P35228 1153 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 SULT1E1P49888 294 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 SLC6A3Q01959 620 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 CCDC173Q0VFZ6 552 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 KCNMA1Q12791 1236 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 ZNF211Q13398 564 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-202ENST00000380276 EXOC3L4Q17RC7 722 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 PIP5KL1Q5T9C9 394 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 GRIN3AQ8TCU5 1115 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 ARRDC3Q96B67 414 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 PDCL3Q9H2J4 239 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 WDCPQ9H6R7 721 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 PLCB1Q9NQ66 1216 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 UCKL1Q9NWZ5 548 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 VPS51Q9UID3 782 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 PCDHGC3Q9UN70 934 aa23.67■■□□□ 1.38
U2AF1-202ENST00000380276 IGSF10Q6WRI0 2623 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 ENDOD1O94919 500 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 MT-CO3P00414 261 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 DGKAP23743 735 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 ACTN2P35609 894 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 RECQLP46063 649 aaPredicted RBP23.66■■□□□ 1.38
U2AF1-202ENST00000380276 E2F1Q01094 437 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 C19orf57Q0VDD7 668 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 ALFQ53S48 1182 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 LRRC31Q6UY01 552 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 LINGO4Q6UY18 593 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 TFAP2DQ7Z6R9 452 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 HORMAD1Q86X24 394 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 SLC25A45Q8N413 288 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 OR13H1Q8NG92 308 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 SLC39A7Q92504 469 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 SHC3Q92529 594 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 FGF11Q92914 225 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 PSMB7Q99436 277 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 TNKS2Q9H2K2 1166 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 PRORYQ9H606 182 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 PIGVQ9NUD9 493 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 HS3ST2Q9Y278 367 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 TBC1D30Q9Y2I9 924 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 DOCK9Q9BZ29 2069 aa23.66■■□□□ 1.38
U2AF1-202ENST00000380276 PRNPP04156 253 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 ALPPL2P10696 532 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 HNRNPA2B1P22626 353 aaKnown RBP23.65■■□□□ 1.38
U2AF1-202ENST00000380276 CLDN2P57739 230 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 DEUP1Q05D60 604 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 PTPN20Q4JDL3 420 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 SLC26A9Q7LBE3 791 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 TMEM145Q8NBT3 493 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 CHST14Q8NCH0 376 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 OR2A12Q8NGT7 310 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 OR4C6Q8NH72 309 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 SNIP1Q8TAD8 396 aaKnown RBP23.65■■□□□ 1.38
U2AF1-202ENST00000380276 KLHL11Q9NVR0 708 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.65■■□□□ 1.38
U2AF1-202ENST00000380276 STAP1Q9ULZ2 295 aa23.65■■□□□ 1.38
U2AF1-202ENST00000380276 SHROOM3Q8TF72 1996 aa23.64■■□□□ 1.38
U2AF1-202ENST00000380276 SMAD6O43541 496 aaKnown RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 PNMA6AP0CW24 399 aaPredicted RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 MTIF2P46199 727 aaKnown RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 ZNF284Q2VY69 593 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 ZNF542PQ5EBM4 170 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 ARSIQ5FYB1 569 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 BRMS1LQ5PSV4 323 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 NEK5Q6P3R8 708 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 ERN2Q76MJ5 926 aaKnown RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 PTAR1Q7Z6K3 402 aaPredicted RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 DCBLD1Q8N8Z6 715 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 RFFLQ8WZ73 363 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 NAF1Q96HR8 494 aaKnown RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 PPP1R16AQ96I34 528 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 LGMNQ99538 433 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 SPON2Q9BUD6 331 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 CAAP1Q9H8G2 361 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 MPP6Q9NZW5 540 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 IL36AQ9UHA7 158 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 AJAP1Q9UKB5 411 aaPredicted RBP23.64■■□□□ 1.37
U2AF1-202ENST00000380276 PCDHB1Q9Y5F3 818 aa23.64■■□□□ 1.37
U2AF1-202ENST00000380276 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-202ENST00000380276 ZIC2O95409 532 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-202ENST00000380276 MYF5P13349 255 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 TFE3P19532 575 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-202ENST00000380276 DNA2P51530 1060 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 OTUD1Q5VV17 481 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-202ENST00000380276 SEL1L3Q68CR1 1132 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 C22orf39Q6P5X5 142 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 SLC47A2Q86VL8 602 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 DCAF4L2Q8NA75 395 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 TMIEQ8NEW7 156 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 ANLNQ9NQW6 1124 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 DNAJC28Q9NX36 388 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 ARHGEF38Q9NXL2 777 aa23.63■■□□□ 1.37
U2AF1-202ENST00000380276 RRN3Q9NYV6 651 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms