RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PDK1Q15118 436 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 DSELQ8IZU8 1212 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 KYQ8NBH2 561 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PPP1R13LQ8WUF5 828 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 FCRL3Q96P31 734 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 MROH8Q9H579 483 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 BCAP29Q9UHQ4 241 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 USP12O75317 370 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CYP2C8P10632 490 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CYTH1Q15438 398 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 GRIK4Q16099 956 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 DCAF4L1Q3SXM0 396 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PID1Q7Z2X4 250 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 SULF1Q8IWU6 871 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 LRRC52Q8N7C0 313 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 TRIML2Q8N7C3 387 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF781Q8N8C0 355 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 RNF139Q8WU17 664 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PKP2Q99959 881 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 RSL24D1Q9UHA3 163 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PADI4Q9UM07 663 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 KCNK1O00180 336 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 SPTLC1O15269 473 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CFLARO15519 480 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 HSPA4LO95757 839 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 POLBP06746 335 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CPA3P15088 417 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 LPIN1Q14693 890 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 METTL21CQ5VZV1 264 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 BNC2Q6ZN30 1099 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ERI1Q8IV48 349 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CRYBG2Q8N1P7 616 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 PLD6Q8N2A8 252 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 BHLHE22Q8NFJ8 381 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 OR52K1Q8NGK4 314 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CERS2Q96G23 380 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 FAM49AQ9H0Q0 323 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CDH19Q9H159 772 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 EIF2B3Q9NR50 452 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 DERAQ9Y315 318 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 MX2P20592 715 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 GP5P40197 560 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF423Q2M1K9 1284 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 CATSPER4Q7RTX7 472 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 AGR3Q8TD06 166 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 DCPSQ96C86 337 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 HAUS8Q9BT25 410 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 NXF3Q9H4D5 531 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 SNX15Q9NRS6 342 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 RGSL1A5PLK6 1076 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PSMC3P17980 439 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PIK3R1P27986 724 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 ACADSBP45954 432 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 RPL34P49207 117 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 GLUD2P49448 558 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PKNOX1P55347 436 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 CREB5Q02930 508 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 ADIGQ0VDE8 80 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 NME3Q13232 169 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 INSCQ1MX18 579 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 FBXO47Q5MNV8 452 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 RNF148Q8N7C7 305 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 TSPAN14Q8NG11 270 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 FNDC8Q8TC99 324 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 HSFY1Q96LI6 401 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 OR52B2Q96RD2 323 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 CCT7Q99832 543 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 NAT9Q9BTE0 207 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
PCDHA1-201ENST00000378133 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 GOLGA8QA0A0J9YX86 632 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 A0A1B0GTW7 788 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 GOLGA8OA6NCC3 632 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 KPNA7A9QM74 516 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 GOLGA8NF8WBI6 632 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 RECQL4O94761 1208 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 SCNN1AP37088 669 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 ABCG1P45844 678 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms