RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 RHOCP08134 193 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 GLDCP23378 1020 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 PSMB4P28070 264 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 USP4Q13107 963 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 C6orf118Q5T5N4 469 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 UBAP2Q5T6F2 1119 aaKnown RBP21.49■■□□□ 1.03
RNF38-205ENST00000377877 TTC39BQ5VTQ0 682 aaPredicted RBP21.49■■□□□ 1.03
RNF38-205ENST00000377877 RNF219Q5W0B1 726 aaPredicted RBP21.49■■□□□ 1.03
RNF38-205ENST00000377877 LRIG3Q6UXM1 1119 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 TMC3Q7Z5M5 1100 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 GORASP1Q9BQQ3 440 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 SPON2Q9BUD6 331 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 FAM129AQ9BZQ8 928 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 WNT6Q9Y6F9 365 aa21.49■■□□□ 1.03
RNF38-205ENST00000377877 ILVBLA1L0T0 632 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 EBAG9O00559 213 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 LUC7L3O95232 432 aaKnown RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 HOXD9P28356 352 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 MZF1P28698 734 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 IFI35P80217 286 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 SLC10A7Q0GE19 358 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 MTM1Q13496 603 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 EMC10Q5UCC4 262 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 C4orf22Q6V702 233 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 OTOP3Q7RTS5 596 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 SETD3Q86TU7 594 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 ADGRG2Q8IZP9 1017 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.48■■□□□ 1.03
RNF38-205ENST00000377877 CELF5Q8N6W0 485 aaKnown RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 BCAS4Q8TDM0 211 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 PPM1EQ8WY54 764 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 MAML1Q92585 1016 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 CLDND1Q9NY35 253 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 ATP8A1Q9Y2Q0 1164 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 A0A1W2PPC1 479 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 HMGB1P1B2RPK0 211 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 APRTP07741 180 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 TCF3P15923 654 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 HOXB8P17481 243 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 IGFBP4P22692 258 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 PARP6Q2NL67 630 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 MPPE1Q53F39 396 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 FNBP1LQ5T0N5 605 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 FYB2Q5VWT5 728 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 TIGD7Q6NT04 549 aaPredicted RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 ZCCHC9Q8N567 271 aaKnown RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 PABPC5Q96DU9 382 aaKnown RBP21.48■■□□□ 1.03
RNF38-205ENST00000377877 ASB16Q96NS5 453 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 RBM22Q9NW64 420 aaKnown RBP eCLIP21.48■■□□□ 1.03
RNF38-205ENST00000377877 TRHDEQ9UKU6 1024 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 SHOC2Q9UQ13 582 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 DOCK8Q8NF50 2099 aa21.48■■□□□ 1.03
RNF38-205ENST00000377877 PPFIA2O75334 1257 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 NFKB1P19838 968 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 WEE1P30291 646 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 CCT5P48643 541 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 IL10RBQ08334 325 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 SEMA5AQ13591 1074 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 ATAT1Q5SQI0 421 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 IL31Q6EBC2 164 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 VAT1Q99536 393 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 SP110Q9HB58 689 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 IGSF9Q9P2J2 1179 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 UNC80Q8N2C7 3258 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 NUP210Q8TEM1 1887 aaPredicted RBP21.47■■□□□ 1.03
RNF38-205ENST00000377877 CHADO15335 359 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 PRAMEF11O60813 436 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 BANF1O75531 89 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 GRIA1P42261 906 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 MAGEA6P43360 314 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 UAP1Q16222 522 aaPredicted RBP21.47■■□□□ 1.03
RNF38-205ENST00000377877 MSS51Q4VC12 460 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 HP1BP3Q5SSJ5 553 aaPredicted RBP21.47■■□□□ 1.03
RNF38-205ENST00000377877 HOOK3Q86VS8 718 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 PDCD7Q8N8D1 485 aaKnown RBP21.47■■□□□ 1.03
RNF38-205ENST00000377877 LRCH3Q96II8 777 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 ATP6V1G3Q96LB4 118 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 ACE2Q9BYF1 805 aaPredicted RBP21.47■■□□□ 1.03
RNF38-205ENST00000377877 SEMA4AQ9H3S1 761 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 PDFQ9HBH1 243 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 OR51B4Q9Y5P0 310 aa21.47■■□□□ 1.03
RNF38-205ENST00000377877 TYW5A2RUC4 315 aaKnown RBP21.46■■□□□ 1.03
RNF38-205ENST00000377877 GOLGA6L10A6NI86 522 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 HLA-DQB2P05538 268 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 FDFT1P37268 417 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 HNRNPDQ14103 355 aaKnown RBP21.46■■□□□ 1.03
RNF38-205ENST00000377877 MPP7Q5T2T1 576 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 MFN1Q8IWA4 741 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 SMARCD2Q92925 531 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 IRF7Q92985 503 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 ALG14Q96F25 216 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 RBM15Q96T37 977 aaKnown RBP eCLIP21.46■■□□□ 1.03
RNF38-205ENST00000377877 FEM1AQ9BSK4 669 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 MUC3BQ9H195 1237 aa21.46■■□□□ 1.03
RNF38-205ENST00000377877 KDELR3O43731 214 aa21.45■■□□□ 1.02
RNF38-205ENST00000377877 AVILO75366 819 aa21.45■■□□□ 1.02
RNF38-205ENST00000377877 POU3F3P20264 500 aaPredicted RBP21.45■■□□□ 1.02
RNF38-205ENST00000377877 NR1D1P20393 614 aa21.45■■□□□ 1.02
RNF38-205ENST00000377877 ETFBP38117 255 aa21.45■■□□□ 1.02
RNF38-205ENST00000377877 CSKP41240 450 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms