RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 C22orf39Q6P5X5 142 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 NCEH1Q6PIU2 408 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 IL27RAQ6UWB1 636 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 VPS36Q86VN1 386 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 NLRP14Q86W24 1093 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 EPAS1Q99814 870 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 SPON2Q9BUD6 331 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 OSGEPQ9NPF4 335 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.35
HMGN4-201ENST00000377575 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
HMGN4-201ENST00000377575 CXorf51AA0A1B0GTR3 108 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 FAM72CH0Y354 149 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SLC7A4O43246 635 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 ATMINO43313 823 aaPredicted RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 RTN2O75298 545 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 CER1O95813 267 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 MT-CO1P00395 513 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 MYBL1P10243 752 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 GLDCP23378 1020 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 PSMA2P25787 234 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 L1CAMP32004 1257 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 RECQLP46063 649 aaPredicted RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 GRIA4P48058 902 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SERPINH1P50454 418 aaKnown RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 GALCP54803 685 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 GEMIN4P57678 1058 aaKnown RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SLC20A2Q08357 652 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 FAM72AQ5TYM5 149 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 FAM72DQ6L9T8 149 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 LINGO4Q6UY18 593 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 FAM72BQ86X60 149 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 OR14C36Q8NHC7 312 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 C1orf216Q8TAB5 229 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 PIP4K2CQ8TBX8 421 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
HMGN4-201ENST00000377575 ZNF653Q96CK0 615 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 CEP44Q9C0F1 390 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SLC32A1Q9H598 525 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 PPM1HQ9ULR3 514 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 HPCAL4Q9UM19 191 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 NEU3Q9UQ49 428 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 SCINQ9Y6U3 715 aa17.2■□□□□ 0.34
HMGN4-201ENST00000377575 UPK3BL1B0FP48 263 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 UPK3BL2E5RIL1 263 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 DDX3XO00571 662 aaKnown RBP eCLIP17.19■□□□□ 0.344e-32■■■■■ 36.1
HMGN4-201ENST00000377575 RAMP2O60895 175 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 CEACAM1P13688 526 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 DRD3P35462 400 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 CCR5P51681 352 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 CCDC15Q0P6D6 951 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 SLC14A1Q13336 389 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
HMGN4-201ENST00000377575 PCDH20Q8N6Y1 951 aaKnown RBP17.19■□□□□ 0.34
HMGN4-201ENST00000377575 FAM131CQ96AQ9 280 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 MAGEH1Q9H213 219 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 KDM4CQ9H3R0 1056 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 TM9SF3Q9HD45 589 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 IFNKQ9P0W0 207 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 CNOT8Q9UFF9 292 aaKnown RBP17.19■□□□□ 0.34
HMGN4-201ENST00000377575 DNAI1Q9UI46 699 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 SARDHQ9UL12 918 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 FZD10Q9ULW2 581 aa17.19■□□□□ 0.34
HMGN4-201ENST00000377575 A0A1W2PPC4 97 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 K7ERQ8 282 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 SMAD6O43541 496 aaKnown RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 ZMPSTE24O75844 475 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 PRNPP04156 253 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 SKILP12757 684 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 EPHB2P29323 1055 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 CHRNA3P32297 505 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 HTR7P34969 479 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 ARF5P84085 180 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 ZBED6P86452 979 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 OGDHQ02218 1023 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 SEMA3BQ13214 749 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 RTL3Q8N8U3 475 aaKnown RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 DEFB124Q8NES8 71 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 TMIEQ8NEW7 156 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 OR2A12Q8NGT7 310 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 OR2I1PQ8NGU4 316 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 FNIP1Q8TF40 1166 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 ARHGEF2Q92974 986 aaKnown RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 PPP1R16AQ96I34 528 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 ACE2Q9BYF1 805 aaPredicted RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 CATSPERBQ9H7T0 1116 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 MRPL47Q9HD33 250 aaKnown RBP17.18■□□□□ 0.34
HMGN4-201ENST00000377575 DYRK4Q9NR20 520 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 NDFIP2Q9NV92 336 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 IL36AQ9UHA7 158 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 CAPN11Q9UMQ6 739 aa17.18■□□□□ 0.34
HMGN4-201ENST00000377575 TBC1D3DA0A087WVF3 549 aa17.17■□□□□ 0.34
HMGN4-201ENST00000377575 TBC1D3IA0A087WXS9 549 aa17.17■□□□□ 0.34
HMGN4-201ENST00000377575 TBC1D3EA0A087X179 549 aa17.17■□□□□ 0.34
HMGN4-201ENST00000377575 TBC1D3KA0A087X1G2 549 aa17.17■□□□□ 0.34
HMGN4-201ENST00000377575 A0A1B0GVT2 93 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms