RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TMEM233B4DJY2 109 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 ALOX15P16050 662 aaPredicted RBP18.44■□□□□ 0.54
SF1-203ENST00000377387 CDK7P50613 346 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 SNX17Q15036 470 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 DUSP28Q4G0W2 176 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 ARHGAP36Q6ZRI8 547 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 RCN3Q96D15 328 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 SH3GL3Q99963 347 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 TKTL2Q9H0I9 626 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 CASS4Q9NQ75 786 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 OR12D3Q9UGF7 316 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 AK5Q9Y6K8 562 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 DFFAO00273 331 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 PDHXO00330 501 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 MYL4P12829 197 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 PDZD4Q76G19 769 aaPredicted RBP18.44■□□□□ 0.54
SF1-203ENST00000377387 SLC10A4Q96EP9 437 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 CRTAC1Q9NQ79 661 aa18.44■□□□□ 0.54
SF1-203ENST00000377387 MPOP05164 745 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 UQCRBP14927 111 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 GSTT1P30711 240 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 PAN2Q504Q3 1202 aaKnown RBP18.43■□□□□ 0.54
SF1-203ENST00000377387 SEL1L3Q68CR1 1132 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 CWF19L1Q69YN2 538 aaKnown RBP18.43■□□□□ 0.54
SF1-203ENST00000377387 GALNT15Q8N3T1 639 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 FAM156AQ8NDB6 213 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 TSNARE1Q96NA8 513 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 WDCPQ9H6R7 721 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 CLEC11AQ9Y240 323 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 PGM3O95394 542 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 ARSAP15289 507 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 TFEBP19484 476 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 PNPLA4P41247 253 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 MTTPP55157 894 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 MPP1Q00013 466 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 SNAPC2Q13487 334 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 ZNF280DQ6N043 979 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 TMC7Q7Z402 723 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 IPMKQ8NFU5 416 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 SMOQ99835 787 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 OXSMQ9NWU1 459 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 ADAM28Q9UKQ2 775 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 H3BNX3 289 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 VAPBO95292 243 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 EPHX2P34913 555 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 NUMBP49757 651 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 THOP1P52888 689 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 PPIDQ08752 370 aaKnown RBP18.43■□□□□ 0.54
SF1-203ENST00000377387 RNF135Q8IUD6 432 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 DSELQ8IZU8 1212 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 TRAPPC9Q96Q05 1148 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 GBA3Q9H227 469 aa18.43■□□□□ 0.54
SF1-203ENST00000377387 HTTP42858 3142 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 XPOTO43592 962 aaKnown RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 TIMM44O43615 452 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 LRIG2O94898 1065 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 AHSGP02765 367 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 XRCC1P18887 633 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 MAGEA12P43365 314 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 RPL14P50914 215 aaKnown RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 DAOAP59103 153 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 UBXN11Q5T124 520 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 FBXL19Q6PCT2 694 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 RPS27LQ71UM5 84 aaKnown RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 CLEC14AQ86T13 490 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 FSTL5Q8N475 847 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 ICA1LQ8NDH6 482 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 TMA16Q96EY4 203 aaKnown RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 PCED1BQ96HM7 432 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 SLC2A13Q96QE2 648 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 RTKNQ9BST9 563 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 FBXW11Q9UKB1 542 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 SBK3P0C264 359 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 GABRB3P28472 473 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 ALDH1A3P47895 512 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 SATB1Q01826 763 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 FOLH1Q04609 750 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 BTKQ06187 659 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 CNPY1Q3B7I2 92 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 KCTD11Q693B1 232 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 APLFQ8IW19 511 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 ST13P4Q8IZP2 240 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 SHCBP1Q8NEM2 672 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 JADE3Q92613 823 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 SENP8Q96LD8 212 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
SF1-203ENST00000377387 PCDHGB4Q9UN71 923 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 PCDHGB5Q9Y5G0 923 aa18.42■□□□□ 0.54
SF1-203ENST00000377387 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
SF1-203ENST00000377387 MATN2O00339 956 aa18.41■□□□□ 0.54
SF1-203ENST00000377387 HDAC3O15379 428 aa18.41■□□□□ 0.54
SF1-203ENST00000377387 GLDCP23378 1020 aa18.41■□□□□ 0.54
SF1-203ENST00000377387 ROR2Q01974 943 aaKnown RBP18.41■□□□□ 0.54
SF1-203ENST00000377387 PDK3Q15120 406 aa18.41■□□□□ 0.54
SF1-203ENST00000377387 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms