RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 FTHL17Q9BXU8 183 aa12.62□□□□□ -0.39
DDR1-224ENST00000376567 CD274Q9NZQ7 290 aa12.62□□□□□ -0.39
DDR1-224ENST00000376567 RNF103-CHMP3A0A140T963 221 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 OR51F1A6NGY5 319 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 STX7O15400 261 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 ITM2AO43736 263 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 GUCA1CO95843 209 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 CCR10P46092 362 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 WNT3AP56704 352 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 XRCC4Q13426 336 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 GRM3Q14832 879 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 TEX44Q53QW1 395 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ZNF280DQ6N043 979 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 DRICH1Q6PGQ1 229 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 CACUL1Q86Y37 369 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 TOP6BLQ8N6T0 577 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 PDZD8Q8NEN9 1154 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 DIS3LQ8TF46 1054 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 HDAC10Q969S8 669 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 NAF1Q96HR8 494 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 UXTQ9UBK9 157 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 VPS28Q9UK41 221 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ATP11BQ9Y2G3 1177 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ADCY6O43306 1168 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 SRP72O76094 671 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 F2P00734 622 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 TBL3Q12788 808 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 FLOT2Q14254 428 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 DNAL1Q4LDG9 190 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ANGPTL8Q6UXH0 198 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 TEKT4Q8WW24 435 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 FGD4Q96M96 766 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 FZD10Q9ULW2 581 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 SLC30A1Q9Y6M5 507 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 COL4A5P29400 1685 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 RREB1Q92766 1687 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 LMNAP02545 664 aaKnown RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 BPGMP07738 259 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 PTPN9P43378 593 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 GRIA4P48058 902 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 ZNF177Q13360 481 aaPredicted RBP12.61□□□□□ -0.39
DDR1-224ENST00000376567 PLD1Q13393 1074 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 TUSC3Q13454 348 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 CDH18Q13634 790 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 C6orf89Q6UWU4 347 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 LINGO4Q6UY18 593 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 SCLYQ96I15 445 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 QKIQ96PU8 341 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDR1-224ENST00000376567 ATP13A1Q9HD20 1204 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
DDR1-224ENST00000376567 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDR1-224ENST00000376567 KATNA1O75449 491 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 FMO4P31512 558 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 GATMP50440 423 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 DSC2Q02487 901 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 GHRHRQ02643 423 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 KLC1Q07866 573 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 GRB14Q14449 540 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 TMTC4Q5T4D3 741 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 FSTL4Q6MZW2 842 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
DDR1-224ENST00000376567 TTC30BQ8N4P2 665 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 RBM15BQ8NDT2 890 aaKnown RBP12.6□□□□□ -0.39
DDR1-224ENST00000376567 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
DDR1-224ENST00000376567 OLIG1Q8TAK6 271 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 DDI1Q8WTU0 396 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 ESAMQ96AP7 390 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 LRRC39Q96DD0 335 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 CDRT15Q96T59 188 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 HBEGFQ99075 208 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 CPNE1Q99829 537 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 POMKQ9H5K3 350 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 DCLRE1BQ9H816 532 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 ABCC13Q9NSE7 274 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 TRIM17Q9Y577 477 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
DDR1-224ENST00000376567 UBR3Q6ZT12 1888 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 C5orf60A6NFR6 353 aa12.6□□□□□ -0.39
DDR1-224ENST00000376567 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms