RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NFKB1P19838 968 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 CCR1P32246 355 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 LBX1P52954 281 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 ALDH18A1P54886 795 aaKnown RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 IRX4P78413 519 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 SLC34A1Q06495 639 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 TUSC3Q13454 348 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 C1orf53Q5VUE5 145 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 METTL21CQ5VZV1 264 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 RWDD4Q6NW29 188 aaKnown RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 POTEHQ6S545 545 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 SPATA2LQ8IUW3 424 aaPredicted RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 KLHDC8BQ8IXV7 354 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 ADAM32Q8TC27 787 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 URGCPQ8TCY9 931 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 SEPT8Q92599 483 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 TOX2Q96NM4 488 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 FCRL5Q96RD9 977 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 TBL1YQ9BQ87 522 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 CEP41Q9BYV8 373 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 PRKD2Q9BZL6 878 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 GPAMQ9HCL2 828 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 ENTPD7Q9NQZ7 604 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 MARCOQ9UEW3 520 aaPredicted RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 EMCNQ9ULC0 261 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 PCDHB12Q9Y5F1 795 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
UBR4-203ENST00000375225 HTTP42858 3142 aa12.45□□□□□ -0.42
UBR4-203ENST00000375225 A0A096LPK6 155 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM72CH0Y354 149 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 ATP9BO43861 1147 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 PSMG1O95456 288 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 JCHAINP01591 159 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 ATP6V1C1P21283 382 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 GJA8P48165 433 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 COPAP53621 1224 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 AP2B1P63010 937 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 PPP2R5DQ14738 602 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM72AQ5TYM5 149 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 OVOS1Q6IE37 1185 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM72DQ6L9T8 149 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FSTL4Q6MZW2 842 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 C16orf46Q6P387 395 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 RAPH1Q70E73 1250 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 SETD3Q86TU7 594 aaPredicted RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 TAC4Q86UU9 113 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM72BQ86X60 149 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 C10orf107Q8IVU9 208 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 KIRREL3Q8IZU9 778 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 GPATCH11Q8N954 259 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 GSTCDQ8NEC7 633 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 DQX1Q8TE96 717 aaKnown RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 EDEM1Q92611 657 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM161BQ96MY7 647 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 SERPINB11Q96P15 392 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 KCNK16Q96T55 309 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 FAM167BQ9BTA0 163 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 KIFC1Q9BW19 673 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 PPP1R12CQ9BZL4 782 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 UBE2OQ9C0C9 1292 aaKnown RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 RHOJQ9H4E5 214 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 NMRAL1Q9HBL8 299 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 TMPRSS4Q9NRS4 437 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
UBR4-203ENST00000375225 STX18Q9P2W9 335 aaKnown RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 TIMM13Q9Y5L4 95 aaPredicted RBP12.44□□□□□ -0.42
UBR4-203ENST00000375225 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 DFFAO00273 331 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 MATN3O15232 486 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 NVLO15381 856 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 IRAK2O43187 625 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 CACNG3O60359 315 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 TRIM13O60858 407 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 COL6A1P12109 1028 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 BDNFP23560 247 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 CRABP2P29373 138 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 HOXC13P31276 330 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 PTDSS1P48651 473 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 NRG1Q02297 640 aaPredicted RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 MTA1Q13330 715 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 SLC12A1Q13621 1099 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 RCN1Q15293 331 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 TRIM60Q495X7 471 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 PKN3Q6P5Z2 889 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 ZCCHC23Q6ZST2 131 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
UBR4-203ENST00000375225 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
UBR4-203ENST00000375225 AFAP1L2Q8N4X5 818 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms