RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NTRK3Q16288 839 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 FAXCQ5TGI0 409 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 PLPPR4Q7Z2D5 763 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ADCK1Q86TW2 530 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 KBTBD6Q86V97 674 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CAMK1DQ8IU85 385 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.21□□□□□ -0.939e-18■■■■■ 31
UBR4-201ENST00000375218 PHKBQ93100 1093 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CNPY3Q9BT09 278 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ST6GALNAC4Q9H4F1 302 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 WDR26Q9H7D7 661 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 EMC7Q9NPA0 242 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CORO1CQ9ULV4 474 aaPredicted RBP9.21□□□□□ -0.93
UBR4-201ENST00000375218 PADI4Q9UM07 663 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 A0A1W2PQ09 198 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 WDR91A4D1P6 747 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 SH2B2O14492 632 aaPredicted RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 SLC5A2P31639 672 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 PRKAA2P54646 552 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 THOC5Q13769 683 aaKnown RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 LINC00346Q8IVM7 164 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 OR52M1Q8NGK5 317 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 MIPEPQ99797 713 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 RSRP1Q9BUV0 290 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 GPR63Q9BZJ6 419 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 SLC5A7Q9GZV3 580 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 TRIM39Q9HCM9 518 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 INTS6Q9UL03 887 aaKnown RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 TRPC5Q9UL62 973 aaPredicted RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 H3BQV1 296 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 MED24O75448 989 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 PRDX5P30044 214 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 GJA5P36382 358 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 GABRB2P47870 512 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 JAG1P78504 1218 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 IL24Q13007 206 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 SYT16Q17RD7 645 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 WHAMMP3Q1A5X7 153 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 KLHL38Q2WGJ6 581 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 DUS1LQ6P1R4 473 aaKnown RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 TMEM200AQ86VY9 491 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 NATD1Q8N6N6 113 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 STYXQ8WUJ0 223 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 KAT2AQ92830 837 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 CYTH2Q99418 400 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 CCDC28BQ9BUN5 200 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 ARHGEF4Q9NR80 690 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.94
UBR4-201ENST00000375218 PACSIN2Q9UNF0 486 aaPredicted RBP9.21□□□□□ -0.94
UBR4-201ENST00000375218 PPM1BO75688 479 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SNRPAP09012 282 aaKnown RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 ITGB6P18564 788 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 FOXK2Q01167 660 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TNFRSF17Q02223 184 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 CES4AQ5XG92 561 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 ZNF813Q6ZN06 617 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 RFX6Q8HWS3 928 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SCML4Q8N228 414 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 KDM1BQ8NB78 822 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 FANCBQ8NB91 859 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TTC16Q8NEE8 873 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TMEM169Q96HH4 297 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 RHOVQ96L33 236 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 OR1F2PQ96R84 312 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TBCDQ9BTW9 1192 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 REV1Q9UBZ9 1251 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TLK1Q9UKI8 766 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 ARHGEF15O94989 841 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 RGS2P41220 211 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 NLRP11P59045 1033 aaKnown RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 PPP2R2AP63151 447 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 CLCQ05315 142 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 TRA2AQ13595 282 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBR4-201ENST00000375218 STILQ15468 1287 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SV2CQ496J9 727 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 C1orf94Q6P1W5 598 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 FBXL16Q8N461 479 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SCFD1Q8WVM8 642 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 SCLYQ96I15 445 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 BATF3Q9NR55 127 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 AGPAT5Q9NUQ2 364 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 AP4E1Q9UPM8 1137 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 CHUKO15111 745 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 IGHEP01854 428 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 ERVK-10P10266 1014 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 AMPD2Q01433 879 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 GFPT1Q06210 699 aaPredicted RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 NPRL3Q12980 569 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 NR1D2Q14995 579 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 KYNUQ16719 465 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 DGKDQ16760 1214 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 ATPAF1Q5TC12 328 aaPredicted RBP9.2□□□□□ -0.94
UBR4-201ENST00000375218 TMC3Q7Z5M5 1100 aa9.2□□□□□ -0.94
UBR4-201ENST00000375218 BPIFCQ8NFQ6 507 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms