RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SERPINB4P48594 390 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 BMPR2Q13873 1038 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 PRKD1Q15139 912 aaPredicted RBP15.88■□□□□ 0.13
CCDC40-202ENST00000374876 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 SMRP1Q8NCR6 262 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 P2RY11Q96G91 374 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 SFXN1Q9H9B4 322 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 UGT1A7Q9HAW7 530 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 UGT1A10Q9HAW8 530 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 UGT1A8Q9HAW9 530 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 SEPT10Q9P0V9 454 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 ZFP69BQ9UJL9 534 aa15.88■□□□□ 0.13
CCDC40-202ENST00000374876 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 EEF2KO00418 725 aaKnown RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PPP1R12AO14974 1030 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 FBXO21O94952 628 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SERPINB9P50453 376 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 LEXMQ3ZCV2 418 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 CCDC149Q6ZUS6 474 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 BNIPLQ7Z465 357 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PDCD7Q8N8D1 485 aaKnown RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 RFWD2Q8NHY2 731 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 ZNF707Q96C28 371 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PCED1BQ96HM7 432 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SEPT5Q99719 369 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SLC13A1Q9BZW2 595 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 LRMDAQ9H2I8 198 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PIGVQ9NUD9 493 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 HAO1Q9UJM8 370 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PLLPQ9Y342 182 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 INSL5Q9Y5Q6 135 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 A0A0G2JND7 137 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SDR42E2A6NKP2 422 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 RFPL1O75677 317 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 AP1G2O75843 785 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 RASSF2P50749 326 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 MGAT5BQ3V5L5 792 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 TAF1BQ53T94 588 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SPDYAQ5MJ70 313 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 ELMSAN1Q6PJG2 1045 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 CDHR3Q6ZTQ4 885 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 RFX8Q6ZV50 586 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 HFE2Q6ZVN8 426 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 MTDHQ86UE4 582 aaKnown RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 SPATA2LQ8IUW3 424 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 NETO2Q8NC67 525 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 MYLPFQ96A32 169 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PRKD2Q9BZL6 878 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 ULBP1Q9BZM6 244 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 EIF2B3Q9NR50 452 aaKnown RBP15.87■□□□□ 0.13
CCDC40-202ENST00000374876 PCDHB5Q9Y5E4 795 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 DOCK6Q96HP0 2047 aa15.87■□□□□ 0.13
CCDC40-202ENST00000374876 VCANP13611 3396 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 VGLL3A8MV65 326 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 MBTPS2O43462 519 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 CCNFP41002 786 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 GPR15P49685 360 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 TWF1Q12792 350 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-202ENST00000374876 MROH9Q5TGP6 573 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 PTCRAQ6ISU1 281 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-202ENST00000374876 CES5AQ6NT32 575 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 LRRC8BQ6P9F7 803 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 ZNF449Q6P9G9 518 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 TRIM42Q8IWZ5 723 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 GPR152Q8TDT2 470 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 SMG7Q92540 1137 aaKnown RBP15.86■□□□□ 0.13
CCDC40-202ENST00000374876 TBC1D31Q96DN5 1066 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 TMEM237Q96Q45 408 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 CEP41Q9BYV8 373 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 PIDD1Q9HB75 910 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 HCFC1R1Q9NWW0 138 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 ZDHHC7Q9NXF8 308 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 MOCS1Q9NZB8 636 aa15.86■□□□□ 0.13
CCDC40-202ENST00000374876 KLF11O14901 512 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 TGDSO95455 350 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 LRG1P02750 347 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 BDNFP23560 247 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CNTFP26441 200 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 ADRA1BP35368 520 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 ARFIP2P53365 341 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 AIF1P55008 147 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 SESN2P58004 480 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 DAOAP59103 153 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 SMARCB1Q12824 385 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 DPYSQ14117 519 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 PAFAH1B3Q15102 231 aaKnown RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 PARP6Q2NL67 630 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 SDHAF4Q5VUM1 108 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CYS1Q717R9 158 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 PDZD4Q76G19 769 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 GPR149Q86SP6 731 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 FAM35AQ86V20 835 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 ADAM32Q8TC27 787 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 SPPL2BQ8TCT7 592 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 INPP5DQ92835 1189 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 OXNAD1Q96HP4 312 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 PCMTD2Q9NV79 361 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 MKS1Q9NXB0 559 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 YIPF1Q9Y548 306 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms