RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CDH6P55285 790 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ZBTB16Q05516 673 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 KRT81Q14533 505 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 PARP15Q460N3 678 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 Q6ZVU0 165 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MMAAQ8IVH4 418 aaKnown RBP21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ACRBPQ8NEB7 543 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 TSC1Q92574 1164 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CELF6Q96J87 481 aaKnown RBP21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CSPG4P5Q96PW8 444 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SLC39A8Q9C0K1 460 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LRRC19Q9H756 370 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 GRPEL1Q9HAV7 217 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 HPCAL4Q9UM19 191 aa21.43■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CXorf51AA0A1B0GTR3 108 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 RNASEH1O60930 286 aaKnown RBP21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ZNF821O75541 412 aaPredicted RBP21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 IPO7O95373 1038 aaKnown RBP21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 KRT7P08729 469 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CD48P09326 243 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 IL4RP24394 825 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 NDST2P52849 883 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 HADHBP55084 474 aaKnown RBP21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 GSDMDP57764 484 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SERINC3Q13530 473 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ELAVL3Q14576 367 aaKnown RBP21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ELF2Q15723 593 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 AFMIDQ63HM1 303 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 PMS2CLQ68D20 193 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LEKR1Q6ZMV7 388 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ZNF354CQ86Y25 554 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 NETO2Q8NC67 525 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ETNK2Q9NVF9 386 aa21.42■■□□□ 1.02
MAP1LC3A-202ENST00000374837 A0A0A6YYK5 440 aaPredicted RBP21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 GOLGA6L3A6NEY3 463 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 BNIP3LO60238 219 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 IGLV3-19P01714 112 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DNTTP04053 509 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CD6P30203 668 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MMRN1Q13201 1228 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CST6Q15828 149 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 C22orf39Q6P5X5 142 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SLC36A4Q6YBV0 504 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ARHGAP12Q8IWW6 846 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DCLK2Q8N568 766 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 NPWQ8N729 165 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 KCTD6Q8NC69 237 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 OR8D1Q8WZ84 308 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 RUBCNQ92622 972 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LOXL4Q96JB6 756 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CEP44Q9C0F1 390 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 TNKS2Q9H2K2 1166 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 PABPC3Q9H361 631 aaKnown RBP21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 KLHL11Q9NVR0 708 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 WSB2Q9NYS7 404 aaPredicted RBP21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 NCDNQ9UBB6 729 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SALL4Q9UJQ4 1053 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 GMEB2Q9UKD1 530 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 FCF1Q9Y324 198 aaKnown RBP21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MFHAS1Q9Y4C4 1052 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 HYOU1Q9Y4L1 999 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DOCK4Q8N1I0 1966 aa21.41■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MCF2LO15068 1137 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 MID1O15344 667 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 BUB1O43683 1085 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 BUB1BO60566 1050 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 RETP07949 1114 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 COMTP21964 271 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 OXTRP30559 389 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SLC8A1P32418 973 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 SLC1A1P43005 524 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 PAPOLAP51003 745 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 GEMIN4P57678 1058 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 RPL6Q02878 288 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DPYSL3Q14195 570 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LPCAT2Q7L5N7 544 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 TMEFF1Q8IYR6 380 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LZTR1Q8N653 840 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DEFB119Q8N690 84 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 OR2A12Q8NGT7 310 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 TOE1Q96GM8 510 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 LACRTQ9GZZ8 138 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 RCOR3Q9P2K3 495 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DUSP10Q9Y6W6 482 aa21.4■■□□□ 1.02
MAP1LC3A-202ENST00000374837 CKAP5Q14008 2032 aa21.39■■□□□ 1.02
MAP1LC3A-202ENST00000374837 DMXL1Q9Y485 3027 aa21.39■■□□□ 1.02
MAP1LC3A-202ENST00000374837 ZSCAN5CA6NGD5 496 aaPredicted RBP21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ARHGAP42A6NI28 874 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 IL1BP01584 269 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PSMD8P48556 350 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 VAV2P52735 878 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PDK2Q15119 407 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 FAM124AQ86V42 546 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TP53INP2Q8IXH6 220 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PCDH20Q8N6Y1 951 aaKnown RBP21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CHST14Q8NCH0 376 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RAPGEF5Q92565 580 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SARDHQ9UL12 918 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PPM1HQ9ULR3 514 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms