RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 MRPL39Q9NYK5 338 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 RPS6KB2Q9UBS0 482 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ALDH1A2O94788 518 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CLTBP09497 229 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 RFX3P48380 749 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 MID1IP1Q9NPA3 183 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 NT5MQ9NPB1 228 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 KLHL28Q9NXS3 571 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 IPPQ9Y573 584 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 FYNP06241 537 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ANXA6P08133 673 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 PCNAP12004 261 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ATP12AP54707 1039 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 FRG1Q14331 258 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 POU6F1Q14863 301 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 OVOS1Q6IE37 1185 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF614Q8N883 585 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ITFG1Q8TB96 612 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ACTRT2Q8TDY3 377 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 FBXO32Q969P5 355 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ADGRE3Q9BY15 652 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 UNKQ9C0B0 810 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SEMA6AQ9H2E6 1030 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 NMRAL1Q9HBL8 299 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CCDC167Q9P0B6 97 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 TAF4O00268 1085 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 AHCYL1O43865 530 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 IL6P05231 212 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 DLG4P78352 724 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 EPS8Q12929 822 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 RGS21Q2M5E4 152 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 TIMM50Q3ZCQ8 353 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 MIB1Q86YT6 1006 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CLEC4DQ8WXI8 215 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 EMILIN2Q9BXX0 1053 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 COL1A2P08123 1366 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 MYL12BO14950 172 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 EPHB6O15197 1021 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 RECQL4O94761 1208 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 HMGCRP04035 888 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CAPN1P07384 714 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ICAM3P32942 547 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 NPY2RP49146 381 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ITGADQ13349 1161 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ZCCHC23Q6ZST2 131 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ILDR2Q71H61 639 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CAMK1DQ8IU85 385 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 BHLHE22Q8NFJ8 381 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR41Q9HAD4 459 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 ADPRHL2Q9NX46 363 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 RRN3Q9NYV6 651 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 NFKBIL1Q9UBC1 381 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CCNE2O96020 404 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 POMCP01189 267 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 LRG1P02750 347 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CCDC130P13994 396 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 MYL12AP19105 171 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 MGAT1P26572 445 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 MAPK10P53779 464 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 AMPD2Q01433 879 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 PRAMEF19Q5SWL8 479 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 RNF43Q68DV7 783 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 IKBIPQ70UQ0 350 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 HTR3CQ8WXA8 447 aa12.46□□□□□ -0.41
NPLOC4-202ENST00000374747 CHD4Q14839 1912 aa12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 CXCL17Q6UXB2 119 aa12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 C8orf59Q8N0T1 100 aaPredicted RBP12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 ASB2Q96Q27 587 aa12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 TSEN34Q9BSV6 310 aaKnown RBP12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 TRIM17Q9Y577 477 aa12.46□□□□□ -0.42
NPLOC4-202ENST00000374747 IGLV3-22A0A075B6J6 115 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 C2CD2LO14523 706 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TGFB1I1O43294 461 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CCNT2O60583 730 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 NR2C2P49116 596 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TKTL1P51854 596 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ANKS6Q68DC2 871 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms