RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TEKT5Q96M29 485 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 CPNE1Q99829 537 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 APOL2Q9BQE5 337 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 GORASP1Q9BQQ3 440 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TUBB6Q9BUF5 446 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 UBP1Q9NZI7 540 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TSC2P49815 1807 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 HNRNPCL1O60812 293 aaKnown RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 IGFBP4P22692 258 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 NPY2RP49146 381 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 STX3Q13277 289 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 PDE1CQ14123 709 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 BRMS1LQ5PSV4 323 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 STXBP5Q5T5C0 1151 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 KCTD11Q693B1 232 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 C16orf46Q6P387 395 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 ARID3BQ8IVW6 561 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 HAPLN3Q96S86 360 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 CASS4Q9NQ75 786 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 C2orf71A6NGG8 1288 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 A8MUI8 341 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 AP3B1O00203 1094 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 IRAK2O43187 625 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 B4GALT3O60512 393 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 PAGE1O75459 146 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 USP1O94782 785 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 KITP10721 976 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 E2F5Q15329 346 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 ANKRD20A4Q4UJ75 823 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 FASTKD1Q53R41 847 aaKnown RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 CERCAMQ5T4B2 595 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 NAPEPLDQ6IQ20 393 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 STRA8Q7Z7C7 330 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 TMEM135Q86UB9 458 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 ATPAF2Q8N5M1 289 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 SLC7A6OSQ96CW6 309 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 CASD1Q96PB1 797 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 PGLYRP2Q96PD5 576 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 MLPHQ9BV36 600 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 IL22Q9GZX6 179 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 CATSPERBQ9H7T0 1116 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 FBXO6Q9NRD1 293 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 TMEM161AQ9NX61 479 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 ARHGEF38Q9NXL2 777 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-202ENST00000374487 KCNK4Q9NYG8 393 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
HMGCL-202ENST00000374487 TRANK1O15050 2925 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 PSMD3O43242 534 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 DNAJC6O75061 913 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 EOMESO95936 686 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 TPH1P17752 444 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 OR1G1P47890 313 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 GTF2A1P52655 376 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 OCRLQ01968 901 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF33AQ06730 810 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 CDH17Q12864 832 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 CTC1Q2NKJ3 1217 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 ZCCHC23Q6ZST2 131 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 LINC00523Q86TU6 105 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF280BQ86YH2 543 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 FIBCD1Q8N539 461 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 ATXN7L3BQ96GX2 97 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 TBC1D10AQ9BXI6 508 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 CHRAC1Q9NRG0 131 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 AAR2Q9Y312 384 aaKnown RBP12.31□□□□□ -0.44
HMGCL-202ENST00000374487 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 UNC80Q8N2C7 3258 aa12.31□□□□□ -0.44
HMGCL-202ENST00000374487 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 MOCS2O96007 188 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 CCNCP24863 283 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 PTPN4P29074 926 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 DBN1Q16643 649 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 LZTR1Q8N653 840 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 CASP10Q92851 521 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 NSL1Q96IY1 281 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms