RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 HIPK3Q9H422 1215 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 VPS45Q9NRW7 570 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 NPY2RP49146 381 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 RETSATQ6NUM9 610 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 IKBIPQ70UQ0 350 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 CENPIQ92674 756 aaPredicted RBP14.52□□□□□ -0.08
TRAF1-201ENST00000373887 BTBD9Q96Q07 612 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 PORCNQ9H237 461 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 ADPRHL2Q9NX46 363 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 SLCO1B7G3V0H7 640 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 RBAK-RBAKDNI3L0D1 243 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 MPOP05164 745 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 YBX3P16989 372 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF37AP17032 561 aaPredicted RBP14.52□□□□□ -0.09
TRAF1-201ENST00000373887 STX12Q86Y82 276 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 NAT16Q8N8M0 369 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 SERPINB11Q96P15 392 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF222Q9UK12 451 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 PURAQ00577 322 aaKnown RBP14.52□□□□□ -0.09
TRAF1-201ENST00000373887 PPIDQ08752 370 aaKnown RBP14.52□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF621Q6ZSS3 439 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 GLT6D1Q7Z4J2 308 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 PEG10Q86TG7 708 aaKnown RBP14.52□□□□□ -0.09
TRAF1-201ENST00000373887 CCNJLQ8IV13 435 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 OSCP1Q8WVF1 389 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 PIGUQ9H490 435 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 ASAH2Q9NR71 780 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 KCNK1O00180 336 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 CES2O00748 559 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 GSTM5P46439 218 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 KLHL12Q53G59 568 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 FBXL19Q6PCT2 694 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 LRRN4Q8WUT4 740 aa14.52□□□□□ -0.09
TRAF1-201ENST00000373887 CLDN5O00501 218 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 CXCL14O95715 111 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 PTPN1P18031 435 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 CCDC153Q494R4 210 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ALKBH2Q6NS38 261 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 MCOLN2Q8IZK6 566 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 GLIS3Q8NEA6 775 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 KLRG1Q96E93 195 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TRAPPC9Q96Q05 1148 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 FRMD8P1Q9BZ68 369 aaPredicted RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 MARCH2Q9P0N8 246 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 UMODL1Q5DID0 1318 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TRAV19A0A0A6YYK7 116 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 PROSCO94903 275 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 LDLRP01130 860 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 WARSP23381 471 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ITGADQ13349 1161 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 CBWD6Q4V339 395 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 MFSD7Q6UXD7 560 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 NIPA1Q7RTP0 329 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 BRSK2Q8IWQ3 736 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 POMKQ9H5K3 350 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ASB7Q9H672 318 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 RXFP1Q9HBX9 757 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ARHGAP23Q9P227 1491 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 LSM8O95777 96 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 KRT6AP02538 564 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 S100A9P06702 114 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 VSIG10LQ86VR7 867 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 FBXO39Q8N4B4 442 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ACP6Q9NPH0 428 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 AHSPQ9NZD4 102 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 CCDC167Q9P0B6 97 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ARMCX1Q9P291 453 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TPRKBQ9Y3C4 175 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 PCDHGA3Q9Y5H0 932 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 SNUPNO95149 360 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 IGSF6O95976 241 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 SERPINF2P08697 491 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TMEM119Q4V9L6 283 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TMEM132CQ8N3T6 1108 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ELL3Q9HB65 397 aaPredicted RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 TMEM138Q9NPI0 162 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 MRPS7Q9Y2R9 242 aaKnown RBP14.51□□□□□ -0.09
TRAF1-201ENST00000373887 HDCP19113 662 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 CNTFP26441 200 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 LGALS3BPQ08380 585 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 UGCGQ16739 394 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 ZCCHC23Q6ZST2 131 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 NLNQ9BYT8 704 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 SLC35C2Q9NQQ7 365 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 MYRFQ9Y2G1 1151 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 FRMPD4Q14CM0 1322 aa14.51□□□□□ -0.09
TRAF1-201ENST00000373887 BTN3A3O00478 584 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 TM9SF1O15321 606 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ITGA1P56199 1179 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 BCL2L1Q07817 233 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 MARK4Q96L34 752 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 TBC1D13Q9NVG8 400 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 COG5Q9UP83 839 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 RAD51BO15315 384 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 CTSEP14091 401 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF24P17028 368 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms