RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 AGBL4Q5VU57 503 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 TBC1D3GQ6DHY5 549 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 TBC1D3CQ6IPX1 549 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 WDR59Q6PJI9 974 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 LINGO4Q6UY18 593 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 TBC1D3Q8IZP1 549 aaPredicted RBP22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 OR2A12Q8NGT7 310 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 SETD7Q8WTS6 366 aaKnown RBP22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 FAM172AQ8WUF8 416 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 CCDC114Q96M63 670 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 SELENOOQ9BVL4 669 aa22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 ACE2Q9BYF1 805 aaPredicted RBP22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 SEPT11Q9NVA2 429 aaKnown RBP22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 FARP1Q9Y4F1 1045 aaPredicted RBP22.21■■□□□ 1.15
CCDC28B-201ENST00000373602 TCRBV5S1A1TA0A578 114 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 SIGLEC16A6NMB1 481 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 SMTNL1A8MU46 457 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 FLRT2O43155 660 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 LATO43561 262 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 ZMPSTE24O75844 475 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 WNT1P04628 370 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 CTSLP07711 333 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 CCDC172P0C7W6 258 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 GPD1P21695 349 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 GLDCP23378 1020 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 CHRNA3P32297 505 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 PPP2CBP62714 309 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 PPP2CAP67775 309 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 GNA12Q03113 381 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 SUZ12Q15022 739 aaKnown RBP22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 ST3GAL2Q16842 350 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 GLRX5Q86SX6 157 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 SKA1Q96BD8 255 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 SPON2Q9BUD6 331 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 RETREG1Q9H6L5 497 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 RTN4Q9NQC3 1192 aaKnown RBP22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 MYO6Q9UM54 1294 aa22.2■■□□□ 1.14
CCDC28B-201ENST00000373602 MAP1BP46821 2468 aaKnown RBP22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 H0Y8X5 98 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 CBX4O00257 560 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 KCNK3O14649 394 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 HYAL3O43820 417 aaPredicted RBP22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 CD38P28907 300 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 C21orf59P57076 290 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 SLC20A2Q08357 652 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 POM121L1PQ3SYA9 428 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 RETSATQ6NUM9 610 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 C22orf39Q6P5X5 142 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 IRF2BP2Q7Z5L9 587 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 DRC7Q8IY82 874 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 CCDC185Q8N715 623 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 TMIEQ8NEW7 156 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 BAHD1Q8TBE0 780 aaPredicted RBP22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 NTAN1Q96AB6 310 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 ATP13A1Q9HD20 1204 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 AASDHPPTQ9NRN7 309 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 NEUROG3Q9Y4Z2 214 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 TMEM131Q92545 1883 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 EPG5Q9HCE0 2579 aa22.19■■□□□ 1.14
CCDC28B-201ENST00000373602 CABIN1Q9Y6J0 2220 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 A0A1W2PR77 199 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 FAM72CH0Y354 149 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 WNT9AO14904 365 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 PCDHGA12O60330 932 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 DFNA5O60443 496 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 ZNF821O75541 412 aaPredicted RBP22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 RHOQP17081 205 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 CCT8P50990 548 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 FAM72AQ5TYM5 149 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 FAM72DQ6L9T8 149 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 CAVIN1Q6NZI2 390 aaKnown RBP22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 DNAJC24Q6P3W2 148 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 PRPF39Q86UA1 669 aaKnown RBP22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 NLRP14Q86W24 1093 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 TRIM69Q86WT6 500 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 FAM72BQ86X60 149 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 RHBDD1Q8TEB9 315 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 BAP1Q92560 729 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 SERAC1Q96JX3 654 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 SYT11Q9BT88 431 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 TMEM121BQ9BXQ6 578 aaPredicted RBP22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 MAGEB5Q9BZ81 275 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 CEP44Q9C0F1 390 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 ARHGAP20Q9P2F6 1191 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 NEU3Q9UQ49 428 aa22.18■■□□□ 1.14
CCDC28B-201ENST00000373602 CXorf51AA0A1B0GTR3 108 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 LRIG2O94898 1065 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 PRNPP04156 253 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 PROS1P07225 676 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 PLEKP08567 350 aaPredicted RBP22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 FTH1P19P0C7X4 201 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 NUDT1P36639 197 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 MAPKAPK2P49137 400 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 SERPINH1P50454 418 aaKnown RBP22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 TAS2R38P59533 333 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 ARF5P84085 180 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 SCAPQ12770 1279 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 PIP5KL1Q5T9C9 394 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 NAPEPLDQ6IQ20 393 aa22.17■■□□□ 1.14
CCDC28B-201ENST00000373602 ACAD10Q6JQN1 1059 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms